| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3952 |
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| Symbol | |
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| ID | 6089905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4359721 |
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| End bp | 4362012 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641599046 |
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| Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
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| Protein accession | YP_001722668 |
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| Protein GI | 170026163 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
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| TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGAATA AGACGATGAC AATTTTAAAT CACACACTGG GTTTTCCGCG TGTTGGTCTG
AAACGTGAAC TGAAGAAAGC ACAAGAAAGT TACTGGGCAG GCAACTCAAC ACAGGAAGAA
TTGCTCAATG TGGGGCGTGA ATTGCGTGCT CGCCATTGGC AACAGCAACA ACAAGCGGGC
GTTGATTTAG TGCCAGTAGG TGATTTCGCT TGGTATGACC ATGTCCTGAC AACCAGCCTG
TTGCTGGGTA ACGTTCCAGA GCGCCACCAA AATGCTGATG GCTCGATTGA TATAGACACG
TTGTTCCGTA TTGGTCGTGG CCGTGCTCCA ACCGGTAAGC CCGCAGCGGC TGCCGAGATG
ACTAAATGGT TTAATACCAA CTATCACTAC ATGGTGCCTG AGTTCCAGCA AGGCCAGCAG
TTTAAACTGG GTTGGACTCA ACTGCTGGAT GAAGTGGACG AAGCGCTGGC CTTGGGCCAC
AAAATTAAAC CTGTGCTGCT TGGCCCGATC ACTTATCTTT GGTTGGGTAA AGTCAAAGGT
GAGCAGTTCG ATCGCCTCTC GCTACTGAAC GATATTTTGC CGGTTTACCA GCAGGTGTTG
GCTGAATTAG CGAAGCGGGG AATCGAGTGG GTGCAGATTG ATGAGCCAGC ATTGGTTCTG
GAATTACCAC AAGAGTGGTT GGATGCCTAT CAACCGGCTT ATCAGGCCCT GCAAGGTCAG
GTCAAATTAT TGCTGACAAC TTACTTCGAC AGTATCGGCC ATAACATCGA CACTATCCGC
GCTCTGCCAG TGCAAGGCTT GCATGTTGAT GTGGTTGCGG GTCATGACGA TCTTGCTGTT
TTGAATAAAA ATTTACCAAA AGAGTGGTTG TTATCTCTGG GGGTCATTAA TGGCCGTAAC
GTATGGCGTG CTGACCTGAG TAGTTGGTTT GAACGTCTGC AGCCATTGGT TAATAGCCGC
CCGCTGTGGT TGGGTAGCTC ATGCTCCTTA TTGCACAGCC CGATTGATTT AAATGAAGAG
ACCCGTCTTG ATGCAGAAGT GAAGAGCTGG TTTGCCTTCG CCCTGCAAAA ATGTGCTGAG
TTAGCGCTGC TAACACAAGC ATTGAATGCA CCTAATGACG CTAAGCTGGC AGAACTGGCT
GCGTACAGTG CGCCGATCCG CGCCCGTCGT TCCTCCAGCC GCGTGCATAA TGCGCAAGTT
GAGCAGCGTT TAGCTGCGAT TACTTCGCAG GATATTGAGC GCCAACTGCC TTATGAAGCA
CGTGCTGAAA CTCAGCGTAA GCGTTTTAAT TTGCCTGCCT GGCCAACCAC GACCATTGGT
TCTTTCCCAC AAACGACAGA GATCCGTGGT TTACGCCTTG ATTTTAAACA AGGTCGTCTG
GACGGTAAAA ACTATCGCAC AGGGATCAGC GAGCATATCA AACAAGCTAT TGCTGAACAG
GAACGCTTGG GCCTGGACGT GCTGGTTCAC GGTGAAGCAG AACGTAACGA CATGGTCGAA
TACTTCGGCG AACACTTGGA TGGTTTTGTC TTTACACAAA ATGGTTGGGT ACAGAGCTAC
GGTTCCCGCT GTGTGAAACC GCCGGTCATC ATTGGTGATA TTAGCCGCCC AGAAGCGATT
ACTGTTGAGT GGGCGAAATA TGCTCAATCC TTAACAGAGA AACCGGTAAA AGGCATGCTT
ACCGGCCCGG TCACTATTCT GTGCTGGTCG TTCCCGCGTG AAGATGTCAG CCGTGAGACG
ATTGCCAAAC AAATTGCGCT GGCTTTGCGT GACGAAGTGG AAGATTTAGA AAAAGCAGGC
ATTGGTATCA TCCAGATTGA TGAACCTGCA TTACGTGAAG GTTTGCCTCT GCGCCGTGCT
GACTGGCAAG CCTATCTGCA ATGGGCCGTC GACGCCTTTA AATTGAATGC CGCTGTGGCG
CAAAACGATA CACAGATCCA TACCCACATG TGTTATTGCG AGTTCAATGA CATCATGGAT
TCCATTGCCG CACTGGATGC TGATGTGATT ACCATCGAAA CCTCCCGCTC AGATATGGAA
CTGTTGGAAT CATTTGAAGA CTTCGCTTAT CCGAATGAAA TTGGTCCCGG TGTTTATGAT
ATTCATTCAC CGAATGTGCC AAGTGTTGAA TGGATTGAAG CGTTATTACG CAAAGCCGCT
CAACGTATTC CGGCCGAGCG TTTGTGGGTG AACCCAGATT GTGGTTTGAA AACCCGCGGC
TGGCCTGAGA CGCGTCAGGC TCTGGCGAAT ATGGTGCTGG CAGCGCAGCG TCTGCGTGAA
GAACAGATTT AA
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| Protein sequence | MGNKTMTILN HTLGFPRVGL KRELKKAQES YWAGNSTQEE LLNVGRELRA RHWQQQQQAG
VDLVPVGDFA WYDHVLTTSL LLGNVPERHQ NADGSIDIDT LFRIGRGRAP TGKPAAAAEM
TKWFNTNYHY MVPEFQQGQQ FKLGWTQLLD EVDEALALGH KIKPVLLGPI TYLWLGKVKG
EQFDRLSLLN DILPVYQQVL AELAKRGIEW VQIDEPALVL ELPQEWLDAY QPAYQALQGQ
VKLLLTTYFD SIGHNIDTIR ALPVQGLHVD VVAGHDDLAV LNKNLPKEWL LSLGVINGRN
VWRADLSSWF ERLQPLVNSR PLWLGSSCSL LHSPIDLNEE TRLDAEVKSW FAFALQKCAE
LALLTQALNA PNDAKLAELA AYSAPIRARR SSSRVHNAQV EQRLAAITSQ DIERQLPYEA
RAETQRKRFN LPAWPTTTIG SFPQTTEIRG LRLDFKQGRL DGKNYRTGIS EHIKQAIAEQ
ERLGLDVLVH GEAERNDMVE YFGEHLDGFV FTQNGWVQSY GSRCVKPPVI IGDISRPEAI
TVEWAKYAQS LTEKPVKGML TGPVTILCWS FPREDVSRET IAKQIALALR DEVEDLEKAG
IGIIQIDEPA LREGLPLRRA DWQAYLQWAV DAFKLNAAVA QNDTQIHTHM CYCEFNDIMD
SIAALDADVI TIETSRSDME LLESFEDFAY PNEIGPGVYD IHSPNVPSVE WIEALLRKAA
QRIPAERLWV NPDCGLKTRG WPETRQALAN MVLAAQRLRE EQI
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