Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3952 |
Symbol | |
ID | 6089905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4359721 |
End bp | 4362012 |
Gene Length | 2292 bp |
Protein Length | 763 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641599046 |
Product | 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase |
Protein accession | YP_001722668 |
Protein GI | 170026163 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0620] Methionine synthase II (cobalamin-independent) |
TIGRFAM ID | [TIGR01371] 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGAATA AGACGATGAC AATTTTAAAT CACACACTGG GTTTTCCGCG TGTTGGTCTG AAACGTGAAC TGAAGAAAGC ACAAGAAAGT TACTGGGCAG GCAACTCAAC ACAGGAAGAA TTGCTCAATG TGGGGCGTGA ATTGCGTGCT CGCCATTGGC AACAGCAACA ACAAGCGGGC GTTGATTTAG TGCCAGTAGG TGATTTCGCT TGGTATGACC ATGTCCTGAC AACCAGCCTG TTGCTGGGTA ACGTTCCAGA GCGCCACCAA AATGCTGATG GCTCGATTGA TATAGACACG TTGTTCCGTA TTGGTCGTGG CCGTGCTCCA ACCGGTAAGC CCGCAGCGGC TGCCGAGATG ACTAAATGGT TTAATACCAA CTATCACTAC ATGGTGCCTG AGTTCCAGCA AGGCCAGCAG TTTAAACTGG GTTGGACTCA ACTGCTGGAT GAAGTGGACG AAGCGCTGGC CTTGGGCCAC AAAATTAAAC CTGTGCTGCT TGGCCCGATC ACTTATCTTT GGTTGGGTAA AGTCAAAGGT GAGCAGTTCG ATCGCCTCTC GCTACTGAAC GATATTTTGC CGGTTTACCA GCAGGTGTTG GCTGAATTAG CGAAGCGGGG AATCGAGTGG GTGCAGATTG ATGAGCCAGC ATTGGTTCTG GAATTACCAC AAGAGTGGTT GGATGCCTAT CAACCGGCTT ATCAGGCCCT GCAAGGTCAG GTCAAATTAT TGCTGACAAC TTACTTCGAC AGTATCGGCC ATAACATCGA CACTATCCGC GCTCTGCCAG TGCAAGGCTT GCATGTTGAT GTGGTTGCGG GTCATGACGA TCTTGCTGTT TTGAATAAAA ATTTACCAAA AGAGTGGTTG TTATCTCTGG GGGTCATTAA TGGCCGTAAC GTATGGCGTG CTGACCTGAG TAGTTGGTTT GAACGTCTGC AGCCATTGGT TAATAGCCGC CCGCTGTGGT TGGGTAGCTC ATGCTCCTTA TTGCACAGCC CGATTGATTT AAATGAAGAG ACCCGTCTTG ATGCAGAAGT GAAGAGCTGG TTTGCCTTCG CCCTGCAAAA ATGTGCTGAG TTAGCGCTGC TAACACAAGC ATTGAATGCA CCTAATGACG CTAAGCTGGC AGAACTGGCT GCGTACAGTG CGCCGATCCG CGCCCGTCGT TCCTCCAGCC GCGTGCATAA TGCGCAAGTT GAGCAGCGTT TAGCTGCGAT TACTTCGCAG GATATTGAGC GCCAACTGCC TTATGAAGCA CGTGCTGAAA CTCAGCGTAA GCGTTTTAAT TTGCCTGCCT GGCCAACCAC GACCATTGGT TCTTTCCCAC AAACGACAGA GATCCGTGGT TTACGCCTTG ATTTTAAACA AGGTCGTCTG GACGGTAAAA ACTATCGCAC AGGGATCAGC GAGCATATCA AACAAGCTAT TGCTGAACAG GAACGCTTGG GCCTGGACGT GCTGGTTCAC GGTGAAGCAG AACGTAACGA CATGGTCGAA TACTTCGGCG AACACTTGGA TGGTTTTGTC TTTACACAAA ATGGTTGGGT ACAGAGCTAC GGTTCCCGCT GTGTGAAACC GCCGGTCATC ATTGGTGATA TTAGCCGCCC AGAAGCGATT ACTGTTGAGT GGGCGAAATA TGCTCAATCC TTAACAGAGA AACCGGTAAA AGGCATGCTT ACCGGCCCGG TCACTATTCT GTGCTGGTCG TTCCCGCGTG AAGATGTCAG CCGTGAGACG ATTGCCAAAC AAATTGCGCT GGCTTTGCGT GACGAAGTGG AAGATTTAGA AAAAGCAGGC ATTGGTATCA TCCAGATTGA TGAACCTGCA TTACGTGAAG GTTTGCCTCT GCGCCGTGCT GACTGGCAAG CCTATCTGCA ATGGGCCGTC GACGCCTTTA AATTGAATGC CGCTGTGGCG CAAAACGATA CACAGATCCA TACCCACATG TGTTATTGCG AGTTCAATGA CATCATGGAT TCCATTGCCG CACTGGATGC TGATGTGATT ACCATCGAAA CCTCCCGCTC AGATATGGAA CTGTTGGAAT CATTTGAAGA CTTCGCTTAT CCGAATGAAA TTGGTCCCGG TGTTTATGAT ATTCATTCAC CGAATGTGCC AAGTGTTGAA TGGATTGAAG CGTTATTACG CAAAGCCGCT CAACGTATTC CGGCCGAGCG TTTGTGGGTG AACCCAGATT GTGGTTTGAA AACCCGCGGC TGGCCTGAGA CGCGTCAGGC TCTGGCGAAT ATGGTGCTGG CAGCGCAGCG TCTGCGTGAA GAACAGATTT AA
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Protein sequence | MGNKTMTILN HTLGFPRVGL KRELKKAQES YWAGNSTQEE LLNVGRELRA RHWQQQQQAG VDLVPVGDFA WYDHVLTTSL LLGNVPERHQ NADGSIDIDT LFRIGRGRAP TGKPAAAAEM TKWFNTNYHY MVPEFQQGQQ FKLGWTQLLD EVDEALALGH KIKPVLLGPI TYLWLGKVKG EQFDRLSLLN DILPVYQQVL AELAKRGIEW VQIDEPALVL ELPQEWLDAY QPAYQALQGQ VKLLLTTYFD SIGHNIDTIR ALPVQGLHVD VVAGHDDLAV LNKNLPKEWL LSLGVINGRN VWRADLSSWF ERLQPLVNSR PLWLGSSCSL LHSPIDLNEE TRLDAEVKSW FAFALQKCAE LALLTQALNA PNDAKLAELA AYSAPIRARR SSSRVHNAQV EQRLAAITSQ DIERQLPYEA RAETQRKRFN LPAWPTTTIG SFPQTTEIRG LRLDFKQGRL DGKNYRTGIS EHIKQAIAEQ ERLGLDVLVH GEAERNDMVE YFGEHLDGFV FTQNGWVQSY GSRCVKPPVI IGDISRPEAI TVEWAKYAQS LTEKPVKGML TGPVTILCWS FPREDVSRET IAKQIALALR DEVEDLEKAG IGIIQIDEPA LREGLPLRRA DWQAYLQWAV DAFKLNAAVA QNDTQIHTHM CYCEFNDIMD SIAALDADVI TIETSRSDME LLESFEDFAY PNEIGPGVYD IHSPNVPSVE WIEALLRKAA QRIPAERLWV NPDCGLKTRG WPETRQALAN MVLAAQRLRE EQI
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