Gene YPK_3951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3951 
Symbol 
ID6090019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4358794 
End bp4359666 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content50% 
IMG OID641599045 
Productcarboxymethylenebutenolidase 
Protein accessionYP_001722667 
Protein GI170026162 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAACGG ATCAACTGGT TAGACTCAGA CAAGCAGCGG GCGGTTTCAC ACCCGCCGGA 
ACCCCATTAA TGGCAACGGC CCACCATACT GACCAACTAC ATTCGTTACA AACCCAAGGT
ATTCACTGTG GGGAAACAAC GATCCCCTCT CAGGGTGATG AGCTACCCGC TTATATTGCT
AAACCTGACC AACATACAGG GCCATACCCT GTGGTGATTG TCGTGCAAGA AATCTTTGGC
GTGCATGAAC ATATTCAGGA TATCTGCCGC CGGCTCGCCA AACAGGGCTA TTTAGCCATA
GCGCCCGAAT TGTATTTTCG TCAGGGCGAT GCCAAAGACT ATAGTAATAT TAATGATTTA
GTGAATAATC TGGTAAAAAA AGTCCCTGAT CGTCAGGTTT TGGTGGATCT CGATCACACC
GCTCATTGGG CATCCCGCCA CGGTGGGGAC ACCAAAAAAT TGGCCATTAC CGGATTTTGC
TGGGGCGGGC GTATCGCATG GTTGTATGCC GCACATAATC CACAGTTGAA GGCGGCCGTG
GCCTGGTATG GCAAATTGGT TGGTGAAAAA ACCTTATTCC TACCGAAATA TCCGGTCGAT
GTTGCTATCG ATCTCTGCGC CCCAGTGTTG GGGCTATATG GAGGTAAAGA CACCAGTATC
CCAGCAGAGC ATATTGAAAC TATGCGCCAG GCATTACGCG CTGCGAATGC CGATGCTGAG
ATTATTGTTT ATCCAGAGGC TGGGCATGCT TTTAATGCCG ACTATCGCCC AAGCTATCAT
GCAGAGTCGG CCCAAGATGG CTGGCAACGT ATGCTTGATT GGTTTACCCA ACATGGTGTC
TCGGCCATCC CCATTCCAGA AGAAACGCAA TAA
 
Protein sequence
MKTDQLVRLR QAAGGFTPAG TPLMATAHHT DQLHSLQTQG IHCGETTIPS QGDELPAYIA 
KPDQHTGPYP VVIVVQEIFG VHEHIQDICR RLAKQGYLAI APELYFRQGD AKDYSNINDL
VNNLVKKVPD RQVLVDLDHT AHWASRHGGD TKKLAITGFC WGGRIAWLYA AHNPQLKAAV
AWYGKLVGEK TLFLPKYPVD VAIDLCAPVL GLYGGKDTSI PAEHIETMRQ ALRAANADAE
IIVYPEAGHA FNADYRPSYH AESAQDGWQR MLDWFTQHGV SAIPIPEETQ