| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3949 |
|---|
| Symbol | |
|---|
| ID | 6090924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 4356640 |
|---|
| End bp | 4357485 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641599043 |
|---|
| Product | protein tyrosine/serine phosphatase |
|---|
| Protein accession | YP_001722665 |
|---|
| Protein GI | 170026160 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2365] Protein tyrosine/serine phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGA CGACCTTCTC TCATCCCTCC CTGATCCCAC TGGATGGCGG TATTAACTTT
CGTGATCTCG GGGGTAACCT TGCCGCTGAT GGCCGGCGGA TAAAGCCCGG CTTGTTATTT
CGTTCCGGTT CGCTTGATCG CTTGAGTACC AACGATTGTG ATTTTCTCAG TCACAGTAAC
GTTACCCAAA TTATTGATTA CCGTGATGCC GATGAAGTAC AGGCTAAGCC AGATGTTTTA
TGGCCGGGTG CCCACTATCA CAATATACCG GCCAACCCGC TCAGTAGTGA GGTGAATGCC
AATCTGGAAA AATTGACTAA CGAGACATTA GCCACATTTG ATGTCCGTGC CTTTATGTTC
GAGCTTTATC ACCGCTTACC TTTTAATAGC TTGGCTTATC AGCAATTGGT CAATTTATTG
CAAAATTGTG CATCAACGGA CCCTGTCGCT AGCAGCGTTG TGCATAGTGG CGATGTGGTA
CATAGAGGTA TTGTACATAG AGGTATTGTA CAGCACTGTG CGGTTGGAAA AGACCGCACG
GGTGTAGGTG CTGCGTTGGT ACTGTTTGCT TTGGGGGCTG ATGAATCTAC TGTGCTGGAA
GATTATCTGT TGACGGAAAC CACCCTGAAG CCTTTTCGTG AGCATATGCT GGCTGAATTG
GCACTAAAAC TGAATGATCA GGCTCTGGCG CAATTTACAT TTGTTCTCTC TGCCAGAGAA
GAGTTTATTC AAACTACGCT GCGGAGCATT CATGAGCGTT ATGGAAGCAG GGAGCGTTGG
TTAAAGCATG AGTTCGGTCT TGGCAGTATT GAGCGTGAAA AACTACAGTC TTATTTTTTA
GAGTAA
|
|---|
| Protein sequence | MTMTTFSHPS LIPLDGGINF RDLGGNLAAD GRRIKPGLLF RSGSLDRLST NDCDFLSHSN
VTQIIDYRDA DEVQAKPDVL WPGAHYHNIP ANPLSSEVNA NLEKLTNETL ATFDVRAFMF
ELYHRLPFNS LAYQQLVNLL QNCASTDPVA SSVVHSGDVV HRGIVHRGIV QHCAVGKDRT
GVGAALVLFA LGADESTVLE DYLLTETTLK PFREHMLAEL ALKLNDQALA QFTFVLSARE
EFIQTTLRSI HERYGSRERW LKHEFGLGSI EREKLQSYFL E
|
|---|
| |