| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3943 |
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| Symbol | ubiB |
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| ID | 6090655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4348808 |
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| End bp | 4350439 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641599037 |
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| Product | putative ubiquinone biosynthesis protein UbiB |
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| Protein accession | YP_001722659 |
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| Protein GI | 170026154 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0661] Predicted unusual protein kinase |
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| TIGRFAM ID | [TIGR01982] 2-polyprenylphenol 6-hydroxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCCAG GAGAACTTCG GCGCCTGTAT TTAATTATTC GGGTCTTCTT GAGTTATGGG
TTGGATGAAT TAATTCCGAA TATACGTCTG ACGCTACCAC TACGGGTTGG GCGTCATCTG
TTTTTTTGGT TATCTAACCG GCATAAAGAT AAGTCATTAG GTGAGCGTTT ACGTCTTGCT
TTGCAGGAGT TGGGACCTGT CTGGATCAAA TTCGGCCAAA TGATGTCCAC GCGCCGCGAC
TTGTTTCCTC CAAATATTGC CGATCAATTA GCTCTGTTAC AAGATCGGGT CGCTTCTTTT
GATGGTGCGC TAGCGCGTAA GCATATTGAG ATTGCGATGG GGGGGGCGTT AGAAACATGG
TTTGATGATT TTGATTCGCA AGCGCTAGCT TCAGCCTCTA TTGCCCAAGT ACATACTGCA
CGCTTAAAAG AGAATGGTAA GGAAGTCGTA CTTAAGGTTA TTCGCCCTGA TATCCTGCCG
ATTATTAAAG CTGATGTACG TTTAATGTAT CGTTTAGCTG GCTGGGTACC AAAGCTTTTA
CCTGATGGTC GCAGATTACG CCCGCGTGAA GTTGTTCGTG AATATGAAAA AACGCTGCTT
GATGAACTGA ATCTTCTGCG TGAAGCAGCG AATGCCATTC AACTGCGTCG TAATTTTGAA
GACAGTCCAA TGCTCTACAT TCCCGAGGTG TACTCGGACT ATTGTCGTGA AAGCGTATTA
GTCATGGAGC GGATTTACGG TATCCCGGTA TCTGATATTG CTGCTTTAGA AGACCAAGGT
ACCAATATGA AGTTACTGGC AGAGCGCGGG GTGCAAGTCT TTTTCACCCA GGTTTTCCGT
GACAGCTTCT TCCACGCAGA TATGCATCCG GGGAATATTT TTGTCAGCTA TGAACATCCT
CATGACCCGC TTTATATTGG TATTGATTGC GGTATTGTTG GCTCACTGAA TAAAGCCGAT
AAACGTTATC TGGCTGAGAA CTTTATTGCT TTCTTTAACC GCGATTACCG CCGGGTTGCT
GAGCTACATG TGGACTCTGG CTGGGTACCT CGAGATACCA ATGTCGAAGA TTTTGAATTC
GCCATCCGTA CCGTTTGTGA ACCTATCTTT GAAAAACCAC TGGCAGAAAT ATCATTTGGG
CATGTGTTGC TGAATCTCTT CAACACCGCG CGCCGTTTTA ATATGGAAGT ACAGCCACAG
TTAGTTCTAT TACAGAAAAC CTTGTTATAC GTTGAAGGGC TAGGGCGTCA GCTTTATCCT
CAGCTTGATC TCTGGACTAC CGCTAAGCCG TTTCTGGAAA GTTGGCTGCG GGACCAGGTC
GGTCTACCTG CCGTAATTCG TGCATTAAAA GAGAAAGCCC CTTTCTGGGC TGAAAAATTC
CCTGAGCTAC CAGAACTGGT TTACGACAGC TTACAGCAGC ATAAATTATT ACAACAAAGT
GTGGAGAAGC TCACTATACA GATACAAGGT CAGCAACAAC GTCAGGGGCA GTCACGGTAT
TTGTTCGGTG TTGGCGCTAC ACTATTAGTG AGCGGTACTA TCTTATTCTT GTCCGATGCA
ACCGAAGTCT CTACAGGGTT CATCGTTGCC GGTGCATTGG CTTGGTTTAT CGGTTGGCGA
CGTACCTGCT AA
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| Protein sequence | MTPGELRRLY LIIRVFLSYG LDELIPNIRL TLPLRVGRHL FFWLSNRHKD KSLGERLRLA
LQELGPVWIK FGQMMSTRRD LFPPNIADQL ALLQDRVASF DGALARKHIE IAMGGALETW
FDDFDSQALA SASIAQVHTA RLKENGKEVV LKVIRPDILP IIKADVRLMY RLAGWVPKLL
PDGRRLRPRE VVREYEKTLL DELNLLREAA NAIQLRRNFE DSPMLYIPEV YSDYCRESVL
VMERIYGIPV SDIAALEDQG TNMKLLAERG VQVFFTQVFR DSFFHADMHP GNIFVSYEHP
HDPLYIGIDC GIVGSLNKAD KRYLAENFIA FFNRDYRRVA ELHVDSGWVP RDTNVEDFEF
AIRTVCEPIF EKPLAEISFG HVLLNLFNTA RRFNMEVQPQ LVLLQKTLLY VEGLGRQLYP
QLDLWTTAKP FLESWLRDQV GLPAVIRALK EKAPFWAEKF PELPELVYDS LQQHKLLQQS
VEKLTIQIQG QQQRQGQSRY LFGVGATLLV SGTILFLSDA TEVSTGFIVA GALAWFIGWR
RTC
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