Gene YPK_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3938 
Symbol 
ID6090667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4345042 
End bp4346064 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content48% 
IMG OID641599032 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_001722654 
Protein GI170026149 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTATG CATTTCCGGG CACCTTTCCT GGTCGCCGTA TGCGCCGTGT ACGCTGTCAT 
GATTTCAGCC GCCGTTTGGT TGCCGAGAAT CACTTGACGG TCAATGACTT GATTTACCCG
GTGTTTGTCA TGGAAGGGAC TCACCAGCAA CAAGCCGTTT CTTCAATGCC GGGGGTCTCT
CGTATGACAA TTGATCTGCT GCTGAAAGAA GCAGAAGCAA TTGCTAAGCT CGGTGTGCCG
GTTATATCGC TATTCCCGGT CATTGAAGCA GGGAAAAAAT CATTATATGC AGAAGAGGCA
TATAACCCGG ATGGTTTAGT TCAGCGTACT GTGCGTGCGT TGAAAGATGC AGTTCCTGAG
CTAGGTATTC TGACTGACGT GGCACTCGAT CCCTATACGA CCCATGGTCA AGATGGTGTG
ATTGATTCTG ATGGTTACGT GATCAATGAT GTCACCAAAG AGATTCTAGT GCGTCAGGCA
CTATCGCATG CTGAAGCTGG CGCTGAGATT ATTGCACCAA GCGATATGAT GGATGGCCGT
ATAGGTGCAA TTCGTGATCA ATTAGAGCGC CAAGGGTTAG TGAACACCCA GATAATGGCT
TATTCGGCTA AGTATGCGTC TTGCTACTAT GGCCCATTCC GCGATGCAAT TGGCTCGAGC
AGTAATCTAA AAGGGGGGGA TAAAAAAACT TATCAGATGG ATCCCGCCAA CAGTGATGAA
GCACTGCAAG AAATAGCTCA AGATTTACAA GAAGGCGCTG ATATGGTGAT GGTAAAACCA
GGAATGCCAT ATCTGGATGT TGTACGCAGG GTGAAAGATA CTTTTGGTGT TCCAACCTTT
GCCTATCAGG TGTCTGGTGA ATATGCCATG CATATGGCAG CGATTCAGAA TGGCTGGCTC
CAAGAGAAAC CGACGGTGAT GGAGTCGTTG TTATGCTTTA AGCGTGCAGG TGCGGATGGC
GTATTAACTT ATTTCGCAAA GCAAGTTGCG CAATGGCTAC ATGATGACCA GATGCAGCGC
TAA
 
Protein sequence
MSYAFPGTFP GRRMRRVRCH DFSRRLVAEN HLTVNDLIYP VFVMEGTHQQ QAVSSMPGVS 
RMTIDLLLKE AEAIAKLGVP VISLFPVIEA GKKSLYAEEA YNPDGLVQRT VRALKDAVPE
LGILTDVALD PYTTHGQDGV IDSDGYVIND VTKEILVRQA LSHAEAGAEI IAPSDMMDGR
IGAIRDQLER QGLVNTQIMA YSAKYASCYY GPFRDAIGSS SNLKGGDKKT YQMDPANSDE
ALQEIAQDLQ EGADMVMVKP GMPYLDVVRR VKDTFGVPTF AYQVSGEYAM HMAAIQNGWL
QEKPTVMESL LCFKRAGADG VLTYFAKQVA QWLHDDQMQR