Gene YPK_3929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3929 
SymbolhemG 
ID6089122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4334105 
End bp4334638 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content43% 
IMG OID641599023 
Productprotoporphyrinogen oxidase 
Protein accessionYP_001722645 
Protein GI170026140 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG4635] Flavodoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000339774 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAC TAATACTTTA CTCCAGCCGA GACGGCCAAA CGAAAACTAT AGCTTCTTAT 
ATAGCTAAGC AATTAACAGA GGCAGCCACT TGTGAAATAC AAGACCTATC TCAAGTAGGC
CAAATCGATC TGAGCCAGTA TCAGCAAGTT ATCATTGGGG CTTCTGTACG GTATGGACAT
TTCAGCCCCG TGTTGAATAA GTTCGTTAAT AAACACGTTG CGCAATTGAG TCAGATGCCA
AGTGCATTCT TTGCTGTGAA CTTAACGGCA CGCAAGCCAG AAAAACGTTC GCCACAAACC
AATACATATG TACGTAAGTT TTTATTGAAC ACTCCCTGGC AGCCAACGTT GTGCTCGGTA
TTCGCTGGTG CTCTGCGTTA TCCACGCTAC AGTTGGATAG ATCGGATAAT GATTCAACTT
ATTATGCGTA TGACTGGGGG AGAAACCGAT ACCAGTAAAG AAGTTGAGTA TACGGATTGG
CAAGAGGTAA GCCGTTTTAC TCAGGATTTC TTGGCACTGC AGTATAAAAA GTAG
 
Protein sequence
MKILILYSSR DGQTKTIASY IAKQLTEAAT CEIQDLSQVG QIDLSQYQQV IIGASVRYGH 
FSPVLNKFVN KHVAQLSQMP SAFFAVNLTA RKPEKRSPQT NTYVRKFLLN TPWQPTLCSV
FAGALRYPRY SWIDRIMIQL IMRMTGGETD TSKEVEYTDW QEVSRFTQDF LALQYKK