Gene YPK_3921 details

Gene Information

• Locus tag: YPK_3921
• ID: 6090087
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 4321256
• End bp: 4323214
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641599013
• Product: acetyl-CoA synthetase
• Protein accession: YP_001722639
• Protein GI: 170026134
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases
• TIGRFAM ID: [TIGR02188] acetate--CoA ligase

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCCAAA TACATAAACA TCCTATTCCA GCTGCAATTG CAGAGCATGC TCTAATTACC 
CCAGAAAAAT ACCAACATTA TTACCAACAA TCAGTGCAGA ACCCTGATGA ATTCTGGGGC 
GAACAAGGCA AAATCATTGA TTGGATTAAA CCCTATAAAA CGGTAAAAAA TACCTCCTTT 
GACCCCGGTC ATGTGAGTAT CCGCTGGTTT GAGGACGGTA CATTGAACCT CGCGGCGAAT 
TGCCTTGATC GCCATTTGGC AGAGCGTGGT GATCAAACAG CCATCATTTG GGAAGGTGAT 
GACCCTAATC AATCAAAAAC CGTCACTTAT AAGCAACTGC ACCATGATGT GTGCCAGTTT 
GCTAATGTCC TAAAAAGTTT AGGCATCAAA AAAGGCGATG TAGTTGCCAT CTATATGCCA 
ATGGTGCCTG AAGCTGCCGT GGCGATGTTG GCTTGCGCGC GCATTGGCGC TGTTCATTCC 
GTTATCTTTG GTGGATTTTC TCCAGATGCC GTTGCCGGGC GTATCATCGA TTCTCACTCT 
AAACTGGTGA TTACTGCCGA TGAAGGTATC CGTGCAGGCC GTGCTATTCC ACTGAAAAAA 
AATGTTGATG AAGCACTGAA AAACCCCGCT ATCACCAGTA TTAAAAATGT TGTGGTCTTC 
CAACGTACTG GTAACGCCAG CTATTGGGAA GATGGGCGCG ATGTATGGTG GCATGACCTG 
ATAAAAGAGG CATCCGCTGA CTGCCCGCCA GAAGAGATGA ATGCAGAAGA CCCGCTGTTC 
ATCCTTTATA CCTCTGGCTC TACCGGTAAA CCTAAAGGGG TTGTACATAC GACGGGCGGT 
TATCTGGTTT ACGCTGCACT GACATTCAAA TATGTTTTTG ATTATCACCC TGGCGATATC 
TACTGGTGTA CTGCAGACGT TGGCTGGGTA ACCGGGCACA GTTATCTATT ATATGGACCA 
CTGGCTTGTG GGGCCATCAC TCTAATGTTT GAAGGCGTGC CTAACTACCC TGGCGTCAAT 
CGCTTGAGCC AGGTTGTTGA TAAACATAAA GTCAATATTC TATACACCGC GCCTACAGCG 
ATTCGGGCCT TAATGGCCGA AGGTGACAAA GCCATCGGAG GAACCAAACG CGACTCACTG 
CGTATTATGG GGTCGGTCGG CGAACCGATT AACCCAGAAG CCTGGGAATG GTATTACAAC 
AAGATCGGTA ACAGTAAATG CCCGATTGTC GATACCTGGT GGCAGACTGA AACCGGTGGT 
TTCATGATAA CCCCTCTGCC GGGTGCCACC GAGTTGAAAG CCGGTTCCGC AACTCGTCCA 
TTCTTTGGGG TACAACCTGC GTTGGTAGAT AACCTGGGCA ATCCTCAGGA AGGGGTGGCA 
GAAGGTAATC TGGTCATAAC CGACTCATGG CCGGGGCAAG CCAGAACATT ATTTGGCGAT 
CATGACCGTT TCGAGCAAAC CTACTTCTCA ACCTTTAAAG GCATGTATTT CAGTGGCGAC 
GGCGCACGTC GTGACGAAGA CGGTTACTAC TGGATAACCG GTCGAGTCGA TGACGTACTA 
AACGTTTCAG GCCATCGCTT AGGAACGGCT GAAATTGAAT CTGCACTGGT TGCACACCCG 
AAAATTGCCG AAGCGGCTGT TGTCGGTGTT CCACATAATA TTAAAGGACA GGCTATTTAT 
GCCTATATCA CGCTAAATCA CGGTGAAGAA CCAACTCCAG AGTTATATAC CGAAGTACGC 
AACTGGGTAC GTAAAGAGAT TGGCCCACTT GCAACACCCG ATATTTTGCA TTGGACGGAC 
TCATTACCCA AAACCCGTTC AGGCAAAATC ATGCGCCGTA TTTTACGCAA AATTGCGACA 
GGAGATACCA GCAACTTGGG CGATACCTCA ACACTTGCCG ATCCAAGCGT GGTAGAAAAA 
TTACTAGAAG AAAAACAATC AATGCAGACA CCGTCGTAA 

 

Protein sequence

MSQIHKHPIP AAIAEHALIT PEKYQHYYQQ SVQNPDEFWG EQGKIIDWIK PYKTVKNTSF 
DPGHVSIRWF EDGTLNLAAN CLDRHLAERG DQTAIIWEGD DPNQSKTVTY KQLHHDVCQF 
ANVLKSLGIK KGDVVAIYMP MVPEAAVAML ACARIGAVHS VIFGGFSPDA VAGRIIDSHS 
KLVITADEGI RAGRAIPLKK NVDEALKNPA ITSIKNVVVF QRTGNASYWE DGRDVWWHDL 
IKEASADCPP EEMNAEDPLF ILYTSGSTGK PKGVVHTTGG YLVYAALTFK YVFDYHPGDI 
YWCTADVGWV TGHSYLLYGP LACGAITLMF EGVPNYPGVN RLSQVVDKHK VNILYTAPTA 
IRALMAEGDK AIGGTKRDSL RIMGSVGEPI NPEAWEWYYN KIGNSKCPIV DTWWQTETGG 
FMITPLPGAT ELKAGSATRP FFGVQPALVD NLGNPQEGVA EGNLVITDSW PGQARTLFGD 
HDRFEQTYFS TFKGMYFSGD GARRDEDGYY WITGRVDDVL NVSGHRLGTA EIESALVAHP 
KIAEAAVVGV PHNIKGQAIY AYITLNHGEE PTPELYTEVR NWVRKEIGPL ATPDILHWTD 
SLPKTRSGKI MRRILRKIAT GDTSNLGDTS TLADPSVVEK LLEEKQSMQT PS