Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3896 |
Symbol | |
ID | 6088722 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4297524 |
End bp | 4298507 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641598988 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001722614 |
Protein GI | 170026109 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.738753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAATAG ATGAAAACAC TTTTGCATTT AGCGCAAAAA TAAATAATCA TGCCATTTAT AAGCATTTAG AGAATTTTAT CAAAATTGTT GAATGCAACA GCCTATCCAT TGCTGCACAT AAATTAAATA TAACACCGTC TTCCACTAGC CGTAGTCTGG CTCAATTAGA GGAGAAGCTC GGTGTGGTAC TATTAAAAAG AACCACTCGC AGCATCGTTT TAACCGATGC TGGCGATTAC TTGTTTCATC AGGCGCGCCA ACTCCTTTTG GATCTGGATG AAACACTGGT TAATACGCAT AGTTTTTATA ACCACCCACA GGGGCAGCTC AAGATTACCT GCTCTATCGC TTTTGGTGTC TGTCATTTAA TGCATCTATT TAGTCAATAT AAAGAAACTA ACAGCGATGT CTGTTTATCG GTGGATTTAA ATGATCAGTT AGTGAATTTA AATGAAGAAC ATTTTGATAT TGCCTTGCGT ATCACCTCAA TTCCCCCGCC TAATTTTGCT ATACGAAGAA TTTGTACCAT TAACTGGGTT TATTGTGGCA GTAAAGAATA TCTAATGAAA CGCGGTGTTC CAGCCACTAT CGAAGATCTT GAGCAACATG ATTGCCTGGT AAACCCTAAC GTTTCCGATG CCTGGTTATA TAAAAGTACA GAGGGTGAGA GCGTCCCCTT GAAAATAAAA AATACCGTGC AGGCCAACAG CAGCCTGGGG TTATTACATG CTGCGCTGCA TCATCAGGGC ATTGTCTGTC TACCTACTTA TATGCTGGGC GACTATATAA CCTCAGGTAA ATTAGTGCCT ATTTTACTGG ATTATAATGC TAAAGATAAA GAATATGGCC TATATGCTTT ATATTACCCT AGCAAATATA ACGATCCAAA AATAAGAAGT TTTATTGATT TTATGTTGGA TGAACTGTCA ATGGACGTGC CATGGGATAA ATGGAGAGCA GATTATCAAA TCTCATTATC CTGA
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Protein sequence | MSIDENTFAF SAKINNHAIY KHLENFIKIV ECNSLSIAAH KLNITPSSTS RSLAQLEEKL GVVLLKRTTR SIVLTDAGDY LFHQARQLLL DLDETLVNTH SFYNHPQGQL KITCSIAFGV CHLMHLFSQY KETNSDVCLS VDLNDQLVNL NEEHFDIALR ITSIPPPNFA IRRICTINWV YCGSKEYLMK RGVPATIEDL EQHDCLVNPN VSDAWLYKST EGESVPLKIK NTVQANSSLG LLHAALHHQG IVCLPTYMLG DYITSGKLVP ILLDYNAKDK EYGLYALYYP SKYNDPKIRS FIDFMLDELS MDVPWDKWRA DYQISLS
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