Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3891 |
Symbol | |
ID | 6089419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4292067 |
End bp | 4292906 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641598983 |
Product | periplasmic binding protein |
Protein accession | YP_001722609 |
Protein GI | 170026104 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4558] ABC-type hemin transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.815625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGACTCC GGTTGCTGTC GCTCCCCTTC ATTCTGTCGC TCTGTGCCCC TCTGCTGCCA CTAAATACCT TGGCGGCAGA ACGTATTGTG ACTATTGGTG GAGATGTAAC AGAAATTGCC TATGCACTCG GTGCAGGTGA TGAGATTGTG GCCCGTGACA GCACCAGTCA ACAGCCTCAG GCAGCGCAAA AGCTGCCTGA TGTTGGTTAT ATGCGCACGC TGAACGCGGA AGGTATTTTG GCGATGAAGC CAACCATGTT GCTGGTTAGT GAACTGGCTC AGCCCTCACT GGTGCTGACG CAGATCGCCA GCAGCGGTGT GAATGTAGTG ACGGTACCAG GCCAGACGAC ACCTGAAAGC GTCGCGATGA AGATTAATGC CGTTGCCACG GCACTTCATC AGACGGAGAA AGGGCAGAAA CTGATCGAAG ACTACCAACA GCGCTTGGCC GCCGTGAACA AGACTCCACT GCCAGTGAAA GTGCTGTTTG TCATGAGCCA TGGCGGGTTA ACACCGATGG CTGCGGGCCA AAATACGGCG GCAGATGCCA TGATCCGTGC GGCGGGTGGC AGTAATGCGA TGCAGGGCTT TAGCCGTTAT CGCCCGCTGT CGCAGGAAGG GGTTATCGCC AGTGCGCCAG ATTTATTATT GATCACCACG GATGGCGTTA AAGCGCTGGG TAGCAGTGAA AATATCTGGA AATTACCGGG TATGGCACTG ACTCCGGCTG GCAAACATAA ACGCCTGTTG GTCGTGGATG ATATGGCATT ACTTGGCTTT GGTCTGGAAA CACCACAAGT GCTTGCACAG CTACGTGAAA AAATGGAACA GATGCAATGA
|
Protein sequence | MRLRLLSLPF ILSLCAPLLP LNTLAAERIV TIGGDVTEIA YALGAGDEIV ARDSTSQQPQ AAQKLPDVGY MRTLNAEGIL AMKPTMLLVS ELAQPSLVLT QIASSGVNVV TVPGQTTPES VAMKINAVAT ALHQTEKGQK LIEDYQQRLA AVNKTPLPVK VLFVMSHGGL TPMAAGQNTA ADAMIRAAGG SNAMQGFSRY RPLSQEGVIA SAPDLLLITT DGVKALGSSE NIWKLPGMAL TPAGKHKRLL VVDDMALLGF GLETPQVLAQ LREKMEQMQ
|
| |