Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3887 |
Symbol | |
ID | 6091138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4287826 |
End bp | 4288476 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641598979 |
Product | NmrA family protein |
Protein accession | YP_001722605 |
Protein GI | 170026100 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00312575 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCCAT GGTTGATATT TGGTGCAGGT CGTGGCGTAG GCGCACATCT GCTAGCGTTA GCAAATCAAC ATGCGGATTC TGCCTCGAAT CCTCGTCCTG TCACCTTGTT GATCCGTAAT CAGCAGCAAG CAGAGGAATT GCGCAACAAA GGTCTGACCG TGGTCTGCGG TGATGCTTGT GATCCGGCCA GTGTGCGCGA AGCCTGCCAA CTAGCCGGTG AGGACGCCGC TATCATTTCG ACGCTGGGTA ATAACAATGC GAACTATCAG GGTAATCGGC TGATCATTGA CACGGCTGAG CAACTGGGGC TGAAGCGTAT GCTTTTGGTT ACATCGATCG GTTGTGGCGA TAGTTGGCCA ACCCTCTCCC CTGCCGCCCG CGCAGCTTTT GGTCAGGCAG TGCGTGAGAA ATCACTGGCC GAGAGTTGGT TACAAACCAG CAACCTGATT TATACCCTGA TTCGGCCGGG TGGCCTATTG GATCAGCCCG CCACCGGTAA CGCAATACGC CTGCAAACAG AAGCCCATGG CATGGTCACG CGTGCAGATG TCGCACACCA TATAAGTCAG ATGATCGAGG ACCCCGCGAC ATATTATCAA GCTTATGCAT TAATTGAGCC AGGATTAGCC CGTAAGGTAA AAATGAATTA A
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Protein sequence | MRPWLIFGAG RGVGAHLLAL ANQHADSASN PRPVTLLIRN QQQAEELRNK GLTVVCGDAC DPASVREACQ LAGEDAAIIS TLGNNNANYQ GNRLIIDTAE QLGLKRMLLV TSIGCGDSWP TLSPAARAAF GQAVREKSLA ESWLQTSNLI YTLIRPGGLL DQPATGNAIR LQTEAHGMVT RADVAHHISQ MIEDPATYYQ AYALIEPGLA RKVKMN
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