Gene YPK_3886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3886 
Symbol 
ID6089185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4287229 
End bp4287792 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content49% 
IMG OID641598978 
Producthypothetical protein 
Protein accessionYP_001722604 
Protein GI170026099 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3721] Putative heme iron utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0909585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACGT CATCGTCTAT AAATACATCG TCCTCTATGA ATAGATCGTC CTCTATGAAT 
AGATCGCCAC TGGCTGAATT CCTTGCCACC CAACCGGATG GCACCTTGGA ACAGATTGCA
CAGGATTACC AGGTCAGCGT ACTTGATGTT GTGCGTGCCT TACCTGAACG AGTCTTGGTA
GGCGCAGAGC ATTTTGATCG TATATGGGAC AGCATGACCG AGTGGGGGGA TGTCACGACC
TTAGTCCATA CCGCCGACGT GATTTTGGAA CACAAAGGCC CACTACCGAG CGGGACTCAC
CGCCATGGCT ATTTCAATTT ACGCAGTAAA CAAGGCCTCA GTGGCCATAT CAGAGCACAA
AATTGCCAGG CAATCGCCCT GCTGGAACGC CCATTTATGG GAATGGCAAC AGCGTCAGTA
CAGTTTTTCA ATCAACAGGG TGAAGTGATG TTTAAAGTCT ATGTTGGCCG TGATGAACAT
CGTCAATTAC GTGCTGATGG CCTTGCCGCA TTCCATCAAT TGGCTCAACA GCTCCTGATT
GAAGACCCGA CCCTGGTTAA ATAA
 
Protein sequence
MNTSSSINTS SSMNRSSSMN RSPLAEFLAT QPDGTLEQIA QDYQVSVLDV VRALPERVLV 
GAEHFDRIWD SMTEWGDVTT LVHTADVILE HKGPLPSGTH RHGYFNLRSK QGLSGHIRAQ
NCQAIALLER PFMGMATASV QFFNQQGEVM FKVYVGRDEH RQLRADGLAA FHQLAQQLLI
EDPTLVK