Gene YPK_3874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3874 
Symbol 
ID6090428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4274933 
End bp4275970 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content49% 
IMG OID641598966 
Productintegral membrane protein TerC 
Protein accessionYP_001722592 
Protein GI170026087 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00122311 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATCCA CCCATATTGG CTTTCCCATT GAGACAGTAG CCGTGTTCAT CCTGCTTTCT 
GTCGGTGCCA TTTGTATCGA TCTTTTCATG CACCGCCATG ATAAGCCAAT CTCTCTGAAA
AGTGCGGCGT TGTGGTCTCT CTTCTGGGTC GCCATCGCTT TTGTATTCGC AGGCTTCCTT
TACCTGCATC ACGGTGCTGA GGCAGCCAGT TTGTTTGTTA CTGGGTATGC GCTTGAAAAA
GTGTTATCCA TTGATAACCT GTTTGTCATG ATGGCTATTT TCTCTTGGTT TGCGGTACCA
GACCGCTTGC GCCATCGCGT ACTGTATTGG GGGATTATCG GGGCTATCGT TTTCCGTGGC
ATTTTCGTCG CCATTGGTAC GGGCTTGCTG ATGCTAGGGC CGTGGGTTGA GGTTGTCTTC
GCGATAGTTG TTGCCTGGAC GGCAGTAATG ATGCTGAGAA AAGGCGATGA TGACGACGCC
ATTGAGGATT ATTCCCAACA TATCGCCTAT CGTTTAGTGA AGCGTTTCTT CCCTATTTGG
CCAAAATTGA GAGGCAATGC CTTTATATTG AGCCAGAAAG AGGTTGATGC AGAACTGGCT
AAACCTGAAA ATGCGGATGT GCAAGTAGGC CGTAAAGGCG GTGTTGCACG TTATGCCACG
CCATTGATGC TCTGTTTGGC CGTGGTTGAA CTGTCAGATG TGATGTTTGC TTTTGACTCT
GTACCGGCGG TGATTGCGGT CAGCCGCGAA CCGTTGATCG TCTACAGTGC GATGATGTTC
GCAATCCTTG GCTTGCGTAC ACTGTATTTT GTACTTGAAG CGCTGAAGCA GTATCTCGTC
CATCTCGAAA AAGCCGTTAT TGTGCTGTTG TTCTTCATCG CCGCTAAGTT GGGCCTGAAT
GCATCTGACC ACTTTTTCAA TCACGGCTAT GATATCTCGG CCAATGTTAG CCTGTTCGTG
GTCATTGGTG TATTGGCGAT CGGTATTGTT GCCAGCTTCC TGTTCCCTGA AAAGGATTCA
AAGGAAGGAC AGCACTAA
 
Protein sequence
MESTHIGFPI ETVAVFILLS VGAICIDLFM HRHDKPISLK SAALWSLFWV AIAFVFAGFL 
YLHHGAEAAS LFVTGYALEK VLSIDNLFVM MAIFSWFAVP DRLRHRVLYW GIIGAIVFRG
IFVAIGTGLL MLGPWVEVVF AIVVAWTAVM MLRKGDDDDA IEDYSQHIAY RLVKRFFPIW
PKLRGNAFIL SQKEVDAELA KPENADVQVG RKGGVARYAT PLMLCLAVVE LSDVMFAFDS
VPAVIAVSRE PLIVYSAMMF AILGLRTLYF VLEALKQYLV HLEKAVIVLL FFIAAKLGLN
ASDHFFNHGY DISANVSLFV VIGVLAIGIV ASFLFPEKDS KEGQH