Gene YPK_3862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3862 
Symbol 
ID6087958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4253673 
End bp4256159 
Gene Length2487 bp 
Protein Length828 aa 
Translation table11 
GC content50% 
IMG OID641598954 
Productglycerol-3-phosphate acyltransferase 
Protein accessionYP_001722580 
Protein GI170026075 
COG category[I] Lipid transport and metabolism 
COG ID[COG2937] Glycerol-3-phosphate O-acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGTT GGCGTAAAAT ATATTATAAG TTACTGAATT TACCACTCAA ATTGTTGGTA 
AAAAGCAAGG TTATCCCTGC AGATCCGGTC TCTGAGCTAG GGCTAGACCC TTCTCGTCCT
ATTCTGTACG TTTTACCTTA CAATTCTAAG GCTGATTTGC TGACGTTACG GGCACAGTGC
TTGGCGCAAG ATCTGCCCGA TCCATTGATT CCATTGGAAA TCGATGGCGT GCAATTGCCC
AGCCATGTGT TTATCGAGAA CGGGCCAAGA GTCTTTCGCT ACTATGTTCC TAAACAAGAA
TCGGTGAAGC TATTCCACGA TTATCTGGAT TTACATCGTA ATAATCCGGC GCTAGATATT
CAGATGTTAC CCGTTTCCGT GATGTTTGGC CGTTCCCCTG GGCGCGAAGG CCACGGTACG
CCACATCTGC GGGTGCTTAA CGGTGTACAG AAATTCTTTG CTGTATTGTG GTTGGGGCGC
GACAGTTTTG TGCGTTTTTC TACCACCGTA TCGCTACGCC GAATGGCCAG TGAACACGGT
ACCGATAAAA CTATCGCCCA TAAACTGGCA CGTGTGGCGC GGATGCACTT CTCTCGTCAA
CGTTTGGCCG CGGTAGGTCC GAGTTTACCT GCCCGTCAGG ATCTGTTTAA AAAACTCTTG
GCCTCTAAGG CTATCGAGAA AGCTGTCGCT GACGAGGCGC GGTCAAAAAA AATCTCCCAT
GAAAAAGCAC AGCAAAACGC CATCACTCTG ATGGAAGAGA TTGCGGCTAA TTTCTCCTAT
GAAGCCGTGC GGTTGTCTGA TCGGGTACTT AGCTGGACGT GGAACCGTTT GTATCAGGGG
ATTAACGTTC ATAATGCAGA GCGGGTCCGG CAATTGGCAC AAGATGGCCA TGAGATCGTC
TATGTACCTT GTCATCGCAG CCATATGGAT TACCTGCTGC TCTCCTATGT GCTCTACCAT
CAGGGGCTGG TCCCACCGCA TATCGCCGCA GGGATTAACC TCAACTTCTG GCCTGCCGGG
CCAATCTTCC GCCGTTTAGG CGCATTCTTT ATCCGCCGTA CCTTTAAAGG CAATAAACTC
TACTCAACGG TGTTCCGCGA ATATCTGGGT GAGCTATTTA CTCGTGGCTA TTCCGTTGAA
TACTTTGTTG AAGGGGGGCG TTCGCGGACT GGCCGCCTGT TGGAGCCGAA AACCGGCACC
TTGTCGATGA CGATTCAGGC CATGTTACGT GGTGGCACCC GCCCTATCAC GTTGGTACCG
ATTTACATCG GCTACGAGCA TGTTATGGAA GTGGGGACTT ACGCCAAAGA GTTGCGCGGT
GCGATAAAAG AAAAAGAGAA CCTGTTACAG ATGCTACGTG GCTTACGTAA GTTGCGTAAT
CTCGGCCAGG GCTATGTGAA CTTTGGCGAA CCCCTGCCAT TGACGACCTA CCTTAATACC
CATGTGCCAC AGTGGCGGGA TGCCATCGAT CCCATTGAAG CACAGCGCCC AAGTTGGCTA
ACACCGGCAG TGAATGATTT GGCTAATCAG ATTATGGTCC GAATCAACAA TGCGGCAGCA
GCAAATGCCA TGAATCTCTG TTCAACGGCG TTACTCGCCT CACGTCAGCG TTCACTAACC
CGCGAGCAGC TACTTGAGCA ACTTGATTGC TATCTGCAAT TAATGCGCAA TGCACCCTAT
GCAAAAGATA CTACCGTGCC GGATAAAACA CCGGAAGAGT TGCTTAATCA CGCCTTGAAT
ATGAATAAGT TTGAGGTGGA GAAAGACACC ATCGGTGACA TCATCATCCT GCCACGGGAA
CAGGCCGTGC TGATGACCTA TTATCGCAAT AATATTCAGC ACTTACTGAT ATTGCCATCG
CTGATTGCCA GTATGGTCAT GTACCACCGC CGGATTACCC GGACGGAGTT ACTGCACAAA
ATCAGCATGA TCTATCCAAT GCTAAAAGCT GAACTGTTCC TGCATTACAG CAAAGAGCAG
CTACCAGAGA CTCTGGATAC ATTGATCGAT GAGCTGGCTC GTCAGCAGTT AATTTGTGAT
AAAGGCAGCG AATTGGTCCT GAATCCGGCA CGCATTCGCC CACTGCAATT GCTGGCCGCA
GGTGTGCGGG AAACGCTACA ACGCTACGCG ATCACACTTT CACTCCTCAG CGCTACCCCC
AGTATCAACC GTGGGGCATT GGAGAAAGAG AGCCGCATTA TGGCGCAGCG CTTGTCGGTT
CTGCATGGTA TTAATGCGCC GGAATTCTTT GATAAAGCGG TCTTCTCAAC GCTGGTTGCG
ACTTTGCGTG AAGAAGGCTA TATCAGTGAT AGCGGTGATG CCATTCAGGA ACATACGCTG
GAAGTTTACA ATATGCTGAG TGCGTTGATG ACCCCAGAAG TAAAGCTGAC TATCGAAAGT
GTCAGTATGC CAGCGGAGAC CAGCAATCAG CCAGAAGCTC CAGAGACACC AGAGACACCA
GAGCCTGAGG GTAAAACGGA ATCCTAA
 
Protein sequence
MSGWRKIYYK LLNLPLKLLV KSKVIPADPV SELGLDPSRP ILYVLPYNSK ADLLTLRAQC 
LAQDLPDPLI PLEIDGVQLP SHVFIENGPR VFRYYVPKQE SVKLFHDYLD LHRNNPALDI
QMLPVSVMFG RSPGREGHGT PHLRVLNGVQ KFFAVLWLGR DSFVRFSTTV SLRRMASEHG
TDKTIAHKLA RVARMHFSRQ RLAAVGPSLP ARQDLFKKLL ASKAIEKAVA DEARSKKISH
EKAQQNAITL MEEIAANFSY EAVRLSDRVL SWTWNRLYQG INVHNAERVR QLAQDGHEIV
YVPCHRSHMD YLLLSYVLYH QGLVPPHIAA GINLNFWPAG PIFRRLGAFF IRRTFKGNKL
YSTVFREYLG ELFTRGYSVE YFVEGGRSRT GRLLEPKTGT LSMTIQAMLR GGTRPITLVP
IYIGYEHVME VGTYAKELRG AIKEKENLLQ MLRGLRKLRN LGQGYVNFGE PLPLTTYLNT
HVPQWRDAID PIEAQRPSWL TPAVNDLANQ IMVRINNAAA ANAMNLCSTA LLASRQRSLT
REQLLEQLDC YLQLMRNAPY AKDTTVPDKT PEELLNHALN MNKFEVEKDT IGDIIILPRE
QAVLMTYYRN NIQHLLILPS LIASMVMYHR RITRTELLHK ISMIYPMLKA ELFLHYSKEQ
LPETLDTLID ELARQQLICD KGSELVLNPA RIRPLQLLAA GVRETLQRYA ITLSLLSATP
SINRGALEKE SRIMAQRLSV LHGINAPEFF DKAVFSTLVA TLREEGYISD SGDAIQEHTL
EVYNMLSALM TPEVKLTIES VSMPAETSNQ PEAPETPETP EPEGKTES