Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3860 |
Symbol | |
ID | 6089021 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4252441 |
End bp | 4253049 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641598952 |
Product | LexA repressor |
Protein accession | YP_001722578 |
Protein GI | 170026073 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.528638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAC TAACTACCAG ACAGCAAGAG GTTTATGACC TGGTCCGCGA TCACCTAGCG CAAACAGGTA TGCCACCGAC CCGTGCCGAG ATTGCGCAGC GTCTGGGGTT TCGCTCTCCT AACGCTGCTG AAGAGCATTT AAAAGCGCTG GCCCGTAAAG GTGTCATTGA AATTGTCTCA GGAGCTTCCC GTGGCATTCG TTTGCTGATG GAAGAAGAAG AGGGCTTGCC ACTGATTGGC CGGGTTGCCG CAGGTGAGCC ATTGCTGGCA CAGCAACATA TTGAAGGGCA TTATAAAGTT GACCCATCCC TGTTCAAGCC AGGTGCGGAT TTCCTGCTGC GGGTTAATGG GATGTCGATG AGAGATATCG GTATTCTAGA TGGTGACTTG TTGGCGGTAC ATAAAACGCA GGATGTGCGT AATGGGCAAG TTGTCGTCGC GCGCATTGAT GATGAAGTCA CGGTAAAACG TTTGAAAAAA CAAGGTAATA TCGTGCATCT CTTACCAGAA AACAGCGAGT TTCAGCCTAT CGTTGTTGAT CTGCGTGAGC AGAGTTTTAC CATTGAAGGT TTGGCCGTCG GAGTTATCCG TAACGGGGAC TGGATCTGA
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Protein sequence | MKALTTRQQE VYDLVRDHLA QTGMPPTRAE IAQRLGFRSP NAAEEHLKAL ARKGVIEIVS GASRGIRLLM EEEEGLPLIG RVAAGEPLLA QQHIEGHYKV DPSLFKPGAD FLLRVNGMSM RDIGILDGDL LAVHKTQDVR NGQVVVARID DEVTVKRLKK QGNIVHLLPE NSEFQPIVVD LREQSFTIEG LAVGVIRNGD WI
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