Gene YPK_3859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3859 
Symbol 
ID6089155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4251748 
End bp4252260 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content48% 
IMG OID641598951 
Productzinc uptake transcriptional repressor 
Protein accessionYP_001722577 
Protein GI170026072 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAACC CTATCAATCA GGAAAAGCTG CTCGCACAAG CTGAAAGCCT GTGCCAACAA 
CGAAACGTCC GGCTGACCCC GCAACGTCTT GAAGTATTAC GTCTAATGGC GCAACAGCCC
GGTGCAATTA GCGCTTATGA TCTGCTGGAT CTACTACGAG TCGCTGAGCC ACAAGCCAAA
CCGCCTACCG TTTATCGCGC ACTGGATTTT TTATTGGAGC AAGGGTTTAT TCACCGTGTT
GAATCAGCCA ATAGCTATGT TCTCTGCCAC CACTTTGAAG AACCCACGCA TACTTCTGCC
TTGTTTATCT GTGATCGCTG CAAGATTGTG ACAGAACGCC CTACCGTTGG TATTGAAGAG
GCATTGGCAC AGTTAGCAAA ACAGTCAGGT TTTACACTGC GCCATAGCGT GGTGGAAGCA
CACGGTTTAT GTACTGAATG TGGGGTAGTT GAAGCCTGCG AAAGCCACGA TGATTGTGAG
CATGACCACT CCATCGTCGT TAAAAAGAAG TAA
 
Protein sequence
MMNPINQEKL LAQAESLCQQ RNVRLTPQRL EVLRLMAQQP GAISAYDLLD LLRVAEPQAK 
PPTVYRALDF LLEQGFIHRV ESANSYVLCH HFEEPTHTSA LFICDRCKIV TERPTVGIEE
ALAQLAKQSG FTLRHSVVEA HGLCTECGVV EACESHDDCE HDHSIVVKKK