| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3854 |
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| Symbol | alr |
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| ID | 6089664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4245482 |
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| End bp | 4246561 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641598946 |
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| Product | alanine racemase |
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| Protein accession | YP_001722572 |
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| Protein GI | 170026067 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00269497 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGCGG CAACAGCAGT CATCGACCGC CATGCTCTGC GACATAACTT ACAACAAATT
CGGCGTCTGG CACCGCAAAG CCGGTTGGTG GCTGTTGTGA AAGCAAATGC TTATGGCCAC
GGGTTATTAG CCGCAGCACA CACATTACAG GATGCTGATT GTTATGGCGT GGCCCGTATT
AGCGAGGCGC TGATGTTGCG AGCGGGTGGA ATAGTTAAAC CTATTTTGCT GCTGGAAGGG
TTCTTTGATG CAGAAGACCT GCCGGTATTG GTGGCTAACC ACATTGAAAC CGCCGTTCAC
AGCCTGGAAC AGCTCGTGGC ATTGGAAGCG GCTACGCTTT CTGCGCCGAT TAATGCCTGG
ATGAAATTGG ATACGGGGAT GCACCGCCTG GGGGTTCGCC CAGATCAGGC CGAAGCGTTT
TATCAGCGTT TGAGCGCATG CCGTAACGTC ATCCAGCCGG TCAATATCAT GAGTCACTTT
AGCCGTGCCG ATGAACCTGA AGTGGCGGCC ACGCAACAGC AACTGGCGTG TTTTGATGCG
TTTGCTGCAG GTAAACCTGG GAAACAATCT ATCGCTGCTT CGGGCGGTAT TCTGCGGTGG
CCACAAGCGC ACCGTGATTG GGTGCGCCCA GGGATTGTGC TGTATGGGGT TTCGCCGTTT
GATGCGCCCT ATGGCCGTGA TTTCGGTTTA TTGCCCGCCA TGACCCTGAA ATCCAGTCTG
ATCGCGGTGC GTGAACATAA AGCTGGTGAA TCGGTCGGGT ATGGCGGCAC CTGGGTCAGT
GAGCGCGATA CGCGTTTAGG TGTGATCGCG ATAGGCTATG GTGATGGCTA CCCACGTAGC
GCCCCGTCAG GGACACCGGT ATGGCTTAAT GGCCGTGAAG TGAGCATCGT TGGCCGGGTA
TCGATGGACA TGATCTCCAT TGATCTTGGC CCGGAAAGTA CAGATAAGGT GGGCGATGAA
GCCCTGATGT GGGGAGCCGA ATTACCGGTT GAACGCGTGG CTGCCTGCAC CGGTATCAGC
GCGTATGAAT TGATCACTAA TCTGACCTCC CGCGTAGCGA TGGAATATCT AGGGGAATAA
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| Protein sequence | MKAATAVIDR HALRHNLQQI RRLAPQSRLV AVVKANAYGH GLLAAAHTLQ DADCYGVARI
SEALMLRAGG IVKPILLLEG FFDAEDLPVL VANHIETAVH SLEQLVALEA ATLSAPINAW
MKLDTGMHRL GVRPDQAEAF YQRLSACRNV IQPVNIMSHF SRADEPEVAA TQQQLACFDA
FAAGKPGKQS IAASGGILRW PQAHRDWVRP GIVLYGVSPF DAPYGRDFGL LPAMTLKSSL
IAVREHKAGE SVGYGGTWVS ERDTRLGVIA IGYGDGYPRS APSGTPVWLN GREVSIVGRV
SMDMISIDLG PESTDKVGDE ALMWGAELPV ERVAACTGIS AYELITNLTS RVAMEYLGE
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