| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3853 |
|---|
| Symbol | |
|---|
| ID | 6090517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 4244103 |
|---|
| End bp | 4245296 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641598945 |
|---|
| Product | aromatic amino acid aminotransferase |
|---|
| Protein accession | YP_001722571 |
|---|
| Protein GI | 170026066 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1448] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCCAGA ATGTTGACGC CTACGCAGGT GACCCCATCC TTTCACTGAT GGAAAGTTTT
AAAGCCGATA ACCGGGCACA TAAGGTGAAT CTGAGTATTG GGCTTTATTA CAATGAACAA
GGTGAAATCC CGCAAATGCA GGCTGTGGAT GCTGCCGAAG CGCAATTGAG TACTCAACCT
CATGGGACAC CGGTTTATTT ACCGATGGAA GGTCTGCAAT CTTACCGTAC TGCTATCCAG
CAATTATTAT TTGGTCACGA CCATCCAATG CTGGTTCAGC AACGGGTGGC GACAATACAG
ACGGTGGGCG GTTCTGGTGC GTTGAAAGTC GGGGCTGATT TCCTTAATCA CTATTTCCCT
GATTCACAGG TGTGGGTCAG CGATCCTACC TGGGAAAACC ACGTGGCTAT TTTTAGCGGC
GCAGGTTTTA AAGTGAACAC CTATCCGTAT TTCGACAATG ATAAGCTGGC GGTGAAGTTT
GACCCGATGC TGGCAACCTT GCAGCAATTG CCCGCCAGAA GCATCGTGTT GTTACATCCT
TGCTGCCACA ATCCAACCGG TTCTGATCTG ACCAATGCCC AATGGGATCG CCTCATTGAT
GTGGTAAAAG AGCGTGAACT GATCCCGTTC CTGGATATAG CGTACCAAGG CTTTGGGGCA
GGGCTGAATG AAGATGCTTA TGCTATCCGC GCTATGGCCG CAGCTGGATT GCCATGCCTC
ATCAGCAACT CCTTCTCAAA AATCTTCTCG CTCTATAACG AGCGGGTCGG TGGTTTATCT
GTGGTGTGTG AAAGTGACGA GGCCGCAGGG CGTGTATTGG GCCAATTGAA AGCGACAGTG
CGCCGTAACT ATTCCAGCCC GCCAAACTTT GGTGCGCAGG TCGTTTCGAA AGTCCTAAAT
GATACGGTAT TGCGCGCGCA ATGGCAGGCA GAGGTGGAAC AGATGCGCCT ACGGATCCTT
GATATGCGCC ACACGCTGGT GGAAGCCTTA AAAGCCTCGT TACCAGAGCG CAATTTTGAT
TATCTGTTGC AACAACGCGG CATGTTCAGC TACACCGGCT TTAGTGAGGC ACAGGTAGAT
CGCTTACGTG AAGAGTTTGG TGTGTATCTG ATTGCGAGCG GAAGAATGTG TATGGCGGGA
GTCAATCACC AGAATGTTGA GCAGGTTGCG GTTGCTTTTG CGGCGGTACA GTAA
|
|---|
| Protein sequence | MFQNVDAYAG DPILSLMESF KADNRAHKVN LSIGLYYNEQ GEIPQMQAVD AAEAQLSTQP
HGTPVYLPME GLQSYRTAIQ QLLFGHDHPM LVQQRVATIQ TVGGSGALKV GADFLNHYFP
DSQVWVSDPT WENHVAIFSG AGFKVNTYPY FDNDKLAVKF DPMLATLQQL PARSIVLLHP
CCHNPTGSDL TNAQWDRLID VVKERELIPF LDIAYQGFGA GLNEDAYAIR AMAAAGLPCL
ISNSFSKIFS LYNERVGGLS VVCESDEAAG RVLGQLKATV RRNYSSPPNF GAQVVSKVLN
DTVLRAQWQA EVEQMRLRIL DMRHTLVEAL KASLPERNFD YLLQQRGMFS YTGFSEAQVD
RLREEFGVYL IASGRMCMAG VNHQNVEQVA VAFAAVQ
|
|---|
| |