Gene YPK_3852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3852 
Symbol 
ID6090418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4243217 
End bp4243576 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content47% 
IMG OID641598944 
Producthypothetical protein 
Protein accessionYP_001722570 
Protein GI170026065 
COG category[S] Function unknown 
COG ID[COG2315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCATT CGGCATTATT GGAATACTGC CTATCTAAAC CGGGGGCAGA GCAGTGCGAA 
CATGAGCAAT GGCAGACGAA TCAAATAAAA GTCGCCGATG TGATGTTTGC AATGGTGGGG
AATATTGGAG GGCGGCCATC GATTTCACTG AAAAGCAGCC CCAAATTGGC AGAACGTTTA
CGGGAGCAGC ACCCAGAGAT TGTACCGAGT GAGCACTTGA ATAAAACGCA CTGGAACACG
GTGTTTCTGG ATGGAAAGTT ACCTAATTCA CAGTTTTATA CGCTGATCGA CCATTCTTAC
CAATTGGTCT TACAAGGATT ACCGGAGCAG AGGCGGCAGG ATCTGTCTTC CCATCTGTAA
 
Protein sequence
MNHSALLEYC LSKPGAEQCE HEQWQTNQIK VADVMFAMVG NIGGRPSISL KSSPKLAERL 
REQHPEIVPS EHLNKTHWNT VFLDGKLPNS QFYTLIDHSY QLVLQGLPEQ RRQDLSSHL