Gene YPK_3850 details

Gene Information

• Locus tag: YPK_3850
• ID: 6089974
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 4239275
• End bp: 4239823
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641598942
• Product: single-stranded DNA-binding protein
• Protein accession: YP_001722568
• Protein GI: 170026063
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAGCA GAGGCGTAAA CAAAGTGATT TTGGTCGGGA ATTTGGGCCA AGACCCGGAA 
GTCCGCTATA TGCCGAACGG CGGCGCTGTT GCCAATATCA CCCTGGCCAC ATCTGAAAGC 
TGGCGTGATA AGCAAACCGG CGAGCAAAAA GAAAAAACAG AATGGCACCG CGTGGTGTTG 
TTCGGAAAAC TTGCCGAAGT GGCTGGTGAA TATCTGCGTA AAGGCTCTCA GGTTTATATT 
GAAGGCGCAC TGCAAACCCG TAAGTGGCAA GATCAAAGTG GCCAGGAACG TTACACCACA 
GAAGTTGTGG TTAACGTGGG TGGTACCATG CAAATGCTAG GGGGCCGTCA GGGCGGTGGT 
GCTCCTGCAG GGGGTGGCGC AGCGCCACAA GACGGCGGGG CACAAGGCGG TTGGGGTCAA 
CCTCAGCAGC CTCAGGGTGG CAATCAATTC AGTGGCGGTC AGGCTTCACG TCCGGCGCAG 
CCTGCGCCAG CCGCACCACA AGGCGGTAAC GAGCCACCAA TGGATTTCGA CGACGACATC 
CCGTTCTAA 

 

Protein sequence

MASRGVNKVI LVGNLGQDPE VRYMPNGGAV ANITLATSES WRDKQTGEQK EKTEWHRVVL 
FGKLAEVAGE YLRKGSQVYI EGALQTRKWQ DQSGQERYTT EVVVNVGGTM QMLGGRQGGG 
APAGGGAAPQ DGGAQGGWGQ PQQPQGGNQF SGGQASRPAQ PAPAAPQGGN EPPMDFDDDI 
PF