Gene YPK_3849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3849 
Symbol 
ID6089855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4238695 
End bp4239009 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content50% 
IMG OID641598941 
ProductL-rhamnose 1-epimerase 
Protein accessionYP_001722567 
Protein GI170026062 
COG category[S] Function unknown 
COG ID[COG3254] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02625] L-rhamnose 1-epimerase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGTA AAGCGTTTGT TATGGCAGTA AATCCGGATG CCCATGCTGA ATATCAGCGA 
CGGCACACGC CAATCTGGCC AGAGCTGGAA AGCGTGCTGA AAGCGCATGG CGCTCACCAC
TATTCCATTT TCCTTGATGA GACTCGCAAT TTACTGTTTG GCGTTGTCGA AATTGAATCA
GAAGAACGCT GGAATGCGGT GGCTCAAACC GCCGAGTGTC AACGCTGGTG GCAACATATG
GCTGATGTCA TGCCAAGCCA CCCGGATAAC AGCCCTGTGA GTCAGGCTCT GCGCGAAGTA
TTTTATCTGG AATGA
 
Protein sequence
MIRKAFVMAV NPDAHAEYQR RHTPIWPELE SVLKAHGAHH YSIFLDETRN LLFGVVEIES 
EERWNAVAQT AECQRWWQHM ADVMPSHPDN SPVSQALREV FYLE