Gene YPK_3847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3847 
Symbol 
ID6089350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4236642 
End bp4237466 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content53% 
IMG OID641598939 
Productrhamnulose-1-phosphate aldolase 
Protein accessionYP_001722565 
Protein GI170026060 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID[TIGR02624] rhamnulose-1-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCTA TTCTATCTTC CTGGTTTATT CAGGGAATGA TTAAAGCCAC CAGTGATATG 
TGGCACAAAG GGTGGGATGA ACGTAACGGC GGCAATATCA GCTTGCGACT GCTCGCTGAA
GAGGTTGAAC CTTATCGTCG TGATTTTTAC CAACAACCCC GCAAAGTGGA GCTCACGCAA
CCGGCTCCCG AACTGGCAAA TAGCTGGTTC CTTGTCACCG GTTCCGGCAA GTTTTTCCGC
AATGTTGAAT TGAACCCAGC GGAAAATCTG GTGTTGCTGC AAGTCAGCAA TGATGGCATG
GCTTATCACA TTCACTGGGG CCTAACTCAG GGAGGGTTAC CCACCTCGGA GCTGGCCGCA
CACTTCCAAT CTCACATCGT CAGGATGCAG GTCAGCGGCG GCACCAACCG GGTCATTATG
CACTGCCATG CCACCAATCT GATTGCCCTG AGTTATGTAC AAAAACTGGA GAACGCCAGC
TTCACGCGCC TGTTATGGGA AGGCAGTACG GAATGTTTGG TGGTATTTCC TGATGGGATT
GGCATTGTGC CATGGATGGT GCCGGGCACC GATGGGATCG GCACACAAAC GGCGGAGCAA
ATGCGTGAAC ACAGCCTGGT GCTTTGGCCT TTCCACGGTA TTTTTGGCAG CGGGCCCACA
CTGGATGACG CCTTTGGCCT GATTGATACC GCCGAGAAAT CAGCCGAAAT CATGGTGAAA
GTCCTGTCGA TGGGCGGCAA AAAACAGACC ATTTCACGTG AACAACTGAT CGCGCTGGCG
GCTCGTTTTG ATGTTACGCC GATGGCAGCG GCGCTGGACG CCTAA
 
Protein sequence
MQAILSSWFI QGMIKATSDM WHKGWDERNG GNISLRLLAE EVEPYRRDFY QQPRKVELTQ 
PAPELANSWF LVTGSGKFFR NVELNPAENL VLLQVSNDGM AYHIHWGLTQ GGLPTSELAA
HFQSHIVRMQ VSGGTNRVIM HCHATNLIAL SYVQKLENAS FTRLLWEGST ECLVVFPDGI
GIVPWMVPGT DGIGTQTAEQ MREHSLVLWP FHGIFGSGPT LDDAFGLIDT AEKSAEIMVK
VLSMGGKKQT ISREQLIALA ARFDVTPMAA ALDA