Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3847 |
Symbol | |
ID | 6089350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4236642 |
End bp | 4237466 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641598939 |
Product | rhamnulose-1-phosphate aldolase |
Protein accession | YP_001722565 |
Protein GI | 170026060 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | [TIGR02624] rhamnulose-1-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGCTA TTCTATCTTC CTGGTTTATT CAGGGAATGA TTAAAGCCAC CAGTGATATG TGGCACAAAG GGTGGGATGA ACGTAACGGC GGCAATATCA GCTTGCGACT GCTCGCTGAA GAGGTTGAAC CTTATCGTCG TGATTTTTAC CAACAACCCC GCAAAGTGGA GCTCACGCAA CCGGCTCCCG AACTGGCAAA TAGCTGGTTC CTTGTCACCG GTTCCGGCAA GTTTTTCCGC AATGTTGAAT TGAACCCAGC GGAAAATCTG GTGTTGCTGC AAGTCAGCAA TGATGGCATG GCTTATCACA TTCACTGGGG CCTAACTCAG GGAGGGTTAC CCACCTCGGA GCTGGCCGCA CACTTCCAAT CTCACATCGT CAGGATGCAG GTCAGCGGCG GCACCAACCG GGTCATTATG CACTGCCATG CCACCAATCT GATTGCCCTG AGTTATGTAC AAAAACTGGA GAACGCCAGC TTCACGCGCC TGTTATGGGA AGGCAGTACG GAATGTTTGG TGGTATTTCC TGATGGGATT GGCATTGTGC CATGGATGGT GCCGGGCACC GATGGGATCG GCACACAAAC GGCGGAGCAA ATGCGTGAAC ACAGCCTGGT GCTTTGGCCT TTCCACGGTA TTTTTGGCAG CGGGCCCACA CTGGATGACG CCTTTGGCCT GATTGATACC GCCGAGAAAT CAGCCGAAAT CATGGTGAAA GTCCTGTCGA TGGGCGGCAA AAAACAGACC ATTTCACGTG AACAACTGAT CGCGCTGGCG GCTCGTTTTG ATGTTACGCC GATGGCAGCG GCGCTGGACG CCTAA
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Protein sequence | MQAILSSWFI QGMIKATSDM WHKGWDERNG GNISLRLLAE EVEPYRRDFY QQPRKVELTQ PAPELANSWF LVTGSGKFFR NVELNPAENL VLLQVSNDGM AYHIHWGLTQ GGLPTSELAA HFQSHIVRMQ VSGGTNRVIM HCHATNLIAL SYVQKLENAS FTRLLWEGST ECLVVFPDGI GIVPWMVPGT DGIGTQTAEQ MREHSLVLWP FHGIFGSGPT LDDAFGLIDT AEKSAEIMVK VLSMGGKKQT ISREQLIALA ARFDVTPMAA ALDA
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