| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3846 |
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| Symbol | |
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| ID | 6089455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4235373 |
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| End bp | 4236629 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641598938 |
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| Product | L-rhamnose isomerase |
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| Protein accession | YP_001722564 |
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| Protein GI | 170026059 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4806] L-rhamnose isomerase |
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| TIGRFAM ID | [TIGR01748] L-rhamnose isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAACT CTATTGAACA GGCCTGGGAT CTGGCTAAAC AGCGTTTTGC CGCTGTCGGC
GTTGATGTTG ATGCCGCACT CACCCGTCTT GATACGCTAC CGGTCTCCAT GCACTGCTGG
CAAGGCGATG ATGTCACCGG TTTTGAGGAT CCCGATGGCG TATTGACCGG CGGAATTCAG
GCAACAGGAA ACTATCCCGG CAAAGCGCGC AATGCGACCG AGTTGCGTTC TGACCTTGAA
TTGGCTTTGG CATTAATTCC TGGCCCTAAG CGCCTCAATT TACATGCTAT TTATCTGGAA
TCTGACACGC CGGTTGCGCG CAATAAAATT GAGCCGCGCC ACTTTAGCCA CTGGGTTGCA
TGGGCCAAAA AACACCAGTT GGGGCTGGAT TTTAACCCCT CTTGCTTCTC TCACCCACTC
AGCGCTGACG GCTTTACCTT GTCTCATGCT GATCCGGAAA TCCGCCAGTT CTGGATTGAA
CACTGTCAGG CGAGTCGCCG GGTTTCTGCC TATTTTGGTG AACAGTTAGG AACGCCGTCG
GTCATGAATA TCTGGATCCC CGATGGTATG AAAGACACGC CGATTGATCG CCTTGCCCCC
CGTCAGCGCC TGCTATCGGC TCTGGATGAA GTCATCAGCG AGAAGTTAAA CCCGGCTCAC
CATATTGATG CGGTTGAGAG CAAATTGTTT GGTATTGGTG CTGAAAGTTA CACCGTAGGC
TCTAACGAGT TTTATATGGG CTATGCCGCC AGTCGCCAAA CGGCGCTGTG TCTGGATGCG
GGTCACTTCC ATCCAACCGA GGTGATTTCC GACAAAATAT CCAGCGCCAT GCTGTATGTC
CCACGCCTGC TATTGCATGT CAGCCGTCCG GTTCGCTGGG ACAGTGACCA TGTGGTGTTA
CTGGATGATG AAACCCAAGC CATCGCCAGC GAAATTATTC GTCACAACCT GTTTGATCGG
GTTCACATCG GCCTCGACTT CTTTGATGCC TCCATTAACC GGATTGCCGC TTGGGTTATT
GGCACCCGCA ACATGAAAAA GGCCCTGCTA CGCGCCTTAC TGGAGCCGAC CGACAGGCTA
CGTCAACTGG AATTACGCGG TGATTACACT GCACGGCTGG CGCTGCTGGA AGAACAAAAA
TCCCTGCCAT GGCAAGCCAT CTGGGAAGGT TACTGCCAGC GCAATGACGT ACCGGTTGAT
GCCCGCTGGC TTGACGCAGT ACGTGAATAT GAACAACAGA TTCTCAGCCA ACGTTAA
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| Protein sequence | MTNSIEQAWD LAKQRFAAVG VDVDAALTRL DTLPVSMHCW QGDDVTGFED PDGVLTGGIQ
ATGNYPGKAR NATELRSDLE LALALIPGPK RLNLHAIYLE SDTPVARNKI EPRHFSHWVA
WAKKHQLGLD FNPSCFSHPL SADGFTLSHA DPEIRQFWIE HCQASRRVSA YFGEQLGTPS
VMNIWIPDGM KDTPIDRLAP RQRLLSALDE VISEKLNPAH HIDAVESKLF GIGAESYTVG
SNEFYMGYAA SRQTALCLDA GHFHPTEVIS DKISSAMLYV PRLLLHVSRP VRWDSDHVVL
LDDETQAIAS EIIRHNLFDR VHIGLDFFDA SINRIAAWVI GTRNMKKALL RALLEPTDRL
RQLELRGDYT ARLALLEEQK SLPWQAIWEG YCQRNDVPVD ARWLDAVREY EQQILSQR
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