Gene YPK_3834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3834 
Symbol 
ID6087314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4226250 
End bp4228805 
Gene Length2556 bp 
Protein Length851 aa 
Translation table11 
GC content34% 
IMG OID641598926 
Productpeptidase M60 viral enhancin protein 
Protein accessionYP_001722552 
Protein GI170026047 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACAAG TAACGAAATC AAAGAAAATT AAAATCTTGC CATACCCAGA ATGGTTAGTT 
AAGGCCGGGA TGTCAAAAGG TATAGATCAT GATAGGCAAC ATTTAGGCAT TATTCTTGCT
GCAGGTGAAA TGATTAAAGT CAGACAAGTC AATGCTGAAT ATAAGGAAAA ACTTAAATTA
TATTTACTCA ATGATAATAA AAATACTCAA CGATCGATAA GTTTTAATAC TGATTGGATA
GAGCTGAGTG TCGATGCTGT TTCAGTACCC TTTATTAATA CCCCATATAG TGATGGGATT
ATTCCTGAGA TTATTTTTGA GTATCCGGAT ACTTCTAAAT TACTGCCAGT TTATGAAAAA
GGAGAGGATG AGAGCATCTT CTTTGAAAGT TGGGATAAAC AGAATGCCGA GTTTGGCGTG
GTAGAATCAG AATATGTAAT AATTCTGATC CCGGAAGTTA GTAAGGACAG GCTAAAATCT
TTCAGTACGA GTGGCGGTAT TGATACAGTT TTGGGGTTTT ATCAAGATAT TTTTTCTTTC
AATAATTCTC TGGCTGGCTT GTCTTTTGAA CCGCAAAGAT ATTCTGACGG AAACACACGA
AATCGTTACT TTGCTAAAGC AGATAAAGGG GGCGGTGGGG CAGCATATTA TTCTAATAAT
TGGATTGCCT CATCCTCTGG TTCTATAAAT ACATTTTGGC TTTCTCCCAA TGCTACTAAC
TGGGGCTGCC TACATGAAAT TGCGCATGGT TATCAGGGCG GGTTTATTGA TGATAAATAT
TTTTCCACAA GAGAAGTATG GAATAATATT TATGCTGCCT GCTACCAAGA TGTTATGTTA
GGTGCTGAAA AGTTTAATAA AGGGTGGCTA TATAATTTCG GTAAGCAAAA AGAGGTTGAA
AAAAGTATTT TAAATAACAT TAATAATGGT AAAGAAGTAA ATGCTTGGGG GGAACGTAGC
AAATTATATT TTATCATGCT GATGCTGGAA AAAGCGGGGG TAAATTGTTT TACTCATTTC
AACCAGATAT ATCGTGAGCG TAAAAATACT GATCAAAGCG TAGGCTCGGT GTTAGATATG
CTCTCAAATA GTTTCGCAAC TGTTGAAAAT CGAGTTGATG TTACACCATT TTTACAAATG
GTTGGGGGAC ATATATCTAA AAATCAATAT CAACGTAACT TATTTAGCCA TGCAAAGGCG
GTATATCCAT TAAATCAACT CTTGCAAGGT GATGAACTCA CTGCTGTTAA GAAAACGCTA
GATTTGAATA GTGAACTCAG TCTTGTTGAT GTGGATAGTA TTGAATTTAC AGATATAAAA
AGTAATTTGA CATTGCAATT TTCTATAGAT GATTTCGCTC AGATATATGG CGAAGAATTG
CTTATACTGA ATGGTGACAA CTATGTGTAT AATCAATCTA TTATGGATAA AAAACAAACT
TTATATAATC TCCCCGTTGG TGCTTATACA TTGCGAATTC CAACAGGAAG AAATAAAAAA
TATGCACCAC AAATTAATTA TCTGATAGTG AAAAATGAAG ATAGCCAAAC ACAAGTTGAT
TTTGTCCACA GAATAGGATC TCCAATTGTT TCACAAAAAA TTTCTTTGCA GGGACTAAAT
GATTATACAT TTGCAACTAT ATTTTTTGAT CAAGAAAATG ATACTGTCAG CGTTGATATT
ACTAAGACTA AACCACATTA TCATTTCCCT GGCATGTATG CGAGAATAAG AATAAAAGAC
AAAGATAATA ATGAGCTACT CAATGAAGTT ATTACAGGAA CTAATCAATC GCTGAGTAAA
AATGATTTTC CACTATCTTC TTGTTATGTT ATTGATATCT TTCACAAAGA GCCTGGTAGG
GTAAAGCTAA CTCCGGCATA TAAAGGTGTG ATTGATAATA AATCCAGTTA CAATGAATTT
ATTATCACGC CTTATGGTTT GCAAAACATC AAATTGAATA ATGATCCAAA GGTTTTTTTA
TTGGAAAATA TAAAATCGGC AGCAGAAACG CTGCGTAGTC ACCCTATAAT GTGGCATGCG
AATTTTTCAG AAGCTAAAGA TAATATATAT TTGGCAATCG ATATCTTTCC TAGCCCACAA
AAGGAAGGTT TACTAGAGCA ATATGCTGAT TGTATTTCTT CCTACTATGA AAAGCCAAAT
GAAGACTTGG GTAATGCATT TAGTTTTATC TTTAAAGGAA TTAATGACCG AGAATTTTTG
ACAGCTAAGC TTAATTTAGT GACAAAAAAA CTTGAAGTTA AAATTGTAAG TGGTACTCCA
CATAGTGGAT TCAAAAGGAC TTACGCTGTA CTACGTTATT TTAATGCTGA TGGAAATGAA
CTCCTTAATC TGGATATTAT TGGTAGTAAA AAACAGGCTG GACAAGAGTG GGTATTCCCT
ATATCAGGTT ATGGTGGAGA AAAACTCTAT CTTCAACATG TGGAACCTAA AAATAGATTA
GTGATTACCA ATATTATGCA AGGAATCAGA TTATCATCGC GCACAAGTAT ACAAACCTAT
GAAATAGAAT CTTTGGGGTT GAGTCGTTGC ACCTGA
 
Protein sequence
MRQVTKSKKI KILPYPEWLV KAGMSKGIDH DRQHLGIILA AGEMIKVRQV NAEYKEKLKL 
YLLNDNKNTQ RSISFNTDWI ELSVDAVSVP FINTPYSDGI IPEIIFEYPD TSKLLPVYEK
GEDESIFFES WDKQNAEFGV VESEYVIILI PEVSKDRLKS FSTSGGIDTV LGFYQDIFSF
NNSLAGLSFE PQRYSDGNTR NRYFAKADKG GGGAAYYSNN WIASSSGSIN TFWLSPNATN
WGCLHEIAHG YQGGFIDDKY FSTREVWNNI YAACYQDVML GAEKFNKGWL YNFGKQKEVE
KSILNNINNG KEVNAWGERS KLYFIMLMLE KAGVNCFTHF NQIYRERKNT DQSVGSVLDM
LSNSFATVEN RVDVTPFLQM VGGHISKNQY QRNLFSHAKA VYPLNQLLQG DELTAVKKTL
DLNSELSLVD VDSIEFTDIK SNLTLQFSID DFAQIYGEEL LILNGDNYVY NQSIMDKKQT
LYNLPVGAYT LRIPTGRNKK YAPQINYLIV KNEDSQTQVD FVHRIGSPIV SQKISLQGLN
DYTFATIFFD QENDTVSVDI TKTKPHYHFP GMYARIRIKD KDNNELLNEV ITGTNQSLSK
NDFPLSSCYV IDIFHKEPGR VKLTPAYKGV IDNKSSYNEF IITPYGLQNI KLNNDPKVFL
LENIKSAAET LRSHPIMWHA NFSEAKDNIY LAIDIFPSPQ KEGLLEQYAD CISSYYEKPN
EDLGNAFSFI FKGINDREFL TAKLNLVTKK LEVKIVSGTP HSGFKRTYAV LRYFNADGNE
LLNLDIIGSK KQAGQEWVFP ISGYGGEKLY LQHVEPKNRL VITNIMQGIR LSSRTSIQTY
EIESLGLSRC T