Gene YPK_3832 details

Gene Information

• Locus tag: YPK_3832
• ID: 6088159
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 4225021
• End bp: 4225596
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641598924
• Product: putative transcriptional regulator
• Protein accession: YP_001722551
• Protein GI: 170026046
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAACGTG AACAAGTTTT AAGTAACGCA CTCAATCTGT TAGAACAGCA AGGGTTGGCA 
AATACCACGC TAGAAATGCT CGCCAAAGCG CTGTCAGTTG AAGTCAGTGA CCTGACACGC 
TTTTGGCCAG ATCGTGAGGC ATTGCTCTAC GATTGCCTGC GCTATCACAG CCAACAGATT 
GATACCTGGC GGCGGCAGCT ACAGCTGGAC GAGACCCTAT CACCGCAGCA AAAGCTACTG 
GCACGCTATC AAACACTGAG CGAGCAAGTG CAAAACCAGC GCTACCCCGG CTGCTTGTTT 
ATTGCTGCCT GCAGTTTCTA TCCTGATACT GAGCACCCTA TTCACCAATT GGCTGAACAG 
CAGAAACAGG CCTCGCTGCA CTATACAAAA GCCTTGCTGC AAGAGATGGA TGCTGACGAT 
GCCGATATGG TCGCACAGCA GATGGAGTTG ATTCTGGAGG GTTGCCTGAG CAAATTACTG 
ATTAAACGTC AGTTGGCAGA TGTTGAGGTT GCCAAATGTT TAGCGGAAGA CATATTAACA 
GTGGCCCAAT GCCGTAAAAA TGGTGCCTTA AGCTGA 

 

Protein sequence

MQREQVLSNA LNLLEQQGLA NTTLEMLAKA LSVEVSDLTR FWPDREALLY DCLRYHSQQI 
DTWRRQLQLD ETLSPQQKLL ARYQTLSEQV QNQRYPGCLF IAACSFYPDT EHPIHQLAEQ 
QKQASLHYTK ALLQEMDADD ADMVAQQMEL ILEGCLSKLL IKRQLADVEV AKCLAEDILT 
VAQCRKNGAL S