Gene YPK_3830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3830 
Symbol 
ID6087847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4222006 
End bp4222563 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content56% 
IMG OID641598922 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001722549 
Protein GI170026044 
COG category[C] Energy production and conversion 
COG ID[COG1142] Fe-S-cluster-containing hydrogenase components 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.994678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGTT TTGTTATCGC TGATATGACT CAGTGCATTG GCTGCCGGAC CTGTGAAATC 
GCCTGTGTGG TGGCGCATCG CGCAGATAAT AAGGTCAGTA CCCTTATGCC GGAGCAGTTT
CACCCACGCC TGAGCGTCAT GAAAAGCTTT GCGGTCAGCA CACCGATACT CTGCCATCAA
TGTGAAGATG CGCCGTGCGA AAACGCCTGC CCAAACGGGG CGATTATCAC GGGGTCCCAT
GGTGTGCAAC TGCTGGCGTC GCGGTGTATC GGCTGTAAAA CCTGCATGTT GGTGTGCCCG
TTTGGTGCCA TGAGCATTAT TGAGCGGCCA GCCGATGGTC AACAGGCGGC AGACAGTCAA
CCGGTGATGG CGAGTGGATC AGGGCGAGCA CAGGCGCATA AATGCGATTT ATGCCATCAG
CGGGAATCCG GCCCAGCTTG TATTGAGGTC TGCCCGACTA ATGCATTGAA ACTGGTGACG
CCAGGGGTAT TGGAAGCCCT ACAGCGCGAA AAACAGTTGC GGGCCGCACG AGGCAGCGCA
CCAGGTATCG CCCGTTAA
 
Protein sequence
MNRFVIADMT QCIGCRTCEI ACVVAHRADN KVSTLMPEQF HPRLSVMKSF AVSTPILCHQ 
CEDAPCENAC PNGAIITGSH GVQLLASRCI GCKTCMLVCP FGAMSIIERP ADGQQAADSQ
PVMASGSGRA QAHKCDLCHQ RESGPACIEV CPTNALKLVT PGVLEALQRE KQLRAARGSA
PGIAR