| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3817 |
|---|
| Symbol | |
|---|
| ID | 6090890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 4207672 |
|---|
| End bp | 4208133 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641598909 |
|---|
| Product | small multidrug resistance protein |
|---|
| Protein accession | YP_001722536 |
|---|
| Protein GI | 170026031 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2076] Membrane transporters of cations and cationic drugs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.113303 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTTT TCTGCTATCT GGGGCTAGCA ATATTGCCGC TAATTATTGA GCATGATAAT
GTATCGCGCT TATCTCTCTG CTGGCTGGGA CGACCCAGTT ACGCATCTGT TTTTCGGGGA
CGGCCCCGCC TGAGCGAGGT GGTTACCATG GCTTGGATTA TTCTGGTTAT TGCAGGTTTA
TTAGAGGTTA TTTGGGCTAT TGGCCTGAAG TATTCTCATG GTTTTTCGCG GCTGACGCCG
AGCATTATTA CCCTCGTCGC AATGGCTGCC AGTGTTTTTC TATTGGCCTA TGCGATGAAA
AGTTTGCCAG CAGGCACGGC TTACGCGGTC TGGACCGGCA TTGGTGCGGT AGGTACGGCC
ATTTTAGGCA TTGTGCTACT GGGGGAATCG GCCAGTCTGG CGCGGATACT AAGCTTGGGG
CTGATTCTGG CAGGGATTAT CGGCTTGAAG TTGGCGTCAT AA
|
|---|
| Protein sequence | MAVFCYLGLA ILPLIIEHDN VSRLSLCWLG RPSYASVFRG RPRLSEVVTM AWIILVIAGL
LEVIWAIGLK YSHGFSRLTP SIITLVAMAA SVFLLAYAMK SLPAGTAYAV WTGIGAVGTA
ILGIVLLGES ASLARILSLG LILAGIIGLK LAS
|
|---|
| |