Gene YPK_3816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3816 
Symbol 
ID6090049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4207151 
End bp4207507 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content50% 
IMG OID641598908 
Productfumarate reductase subunit D 
Protein accessionYP_001722535 
Protein GI170026030 
COG category[C] Energy production and conversion 
COG ID[COG3080] Fumarate reductase subunit D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.281989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAG TCCCTAAACG CTCCGATGAA CCGATCTTCT GGGGTCTGTT TGGTGCGGGT 
GGCATGTGGG GTGCAATTAT TGCCCCTGTG ATTATTCTGC TGGTCGCGAT TTTGTTGCCA
TTGGGTGCAT TCCCAGGCGA CGCGCTGAGC TACGAACGCA TTCTGGCATT TTGTCAGAGC
TTTATTAGCC GGGTATTCCT GCTGCTGATG ATCATTTTGC CTTTGTGGTG CGGTTTACAC
CGTATTCATC ATGCAATGCA TGATTTGAAA ATCCACGTCC CGGCAGGGAA ATGGGTATTC
TATGGCCTTG CGGCAATCTT GAGTGTGGTC ACTTTTATCG GTGTACTGAC GCTGTAG
 
Protein sequence
MNQVPKRSDE PIFWGLFGAG GMWGAIIAPV IILLVAILLP LGAFPGDALS YERILAFCQS 
FISRVFLLLM IILPLWCGLH RIHHAMHDLK IHVPAGKWVF YGLAAILSVV TFIGVLTL