| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3811 |
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| Symbol | |
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| ID | 6087245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4199154 |
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| End bp | 4202495 |
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| Gene Length | 3342 bp |
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| Protein Length | 1113 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641598903 |
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| Product | hypothetical protein |
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| Protein accession | YP_001722530 |
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| Protein GI | 170026025 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.408276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCCCGA TAATTTCATG GTCTTTTGGT CTATTACTGT CGTTTTTCCT GTTAATGCCG
CTATATGCGG CAACTCAGCC TAACGAAGAG CAGGTGCGGC AAGAGCTGAA GCTGGCTGAG
TCCAATAAAA CGACACCGAA TCAGGCAGAG ATTGTTCAGG CGCTTCAAGG GGCTCTTAGC
TGGCTTGCGG ATGCAAAAGA ATCAGATATA CGCGCCCAGC AGTATCAAAA AGCCATTGAT
GATTTTCCTA AGCTTACTCG CGAGTTACGT CAGCAATTAG CCCAGGAAGG GGATAAACCT
TTGCCGGTCC CCAGCAACTT GTCCACATCT GATTTGGAAC AACAGGTGCT ACAAGTCAGC
AGCCAATTGC TGGAGCTGAA CCGTTTATCA CAGCAAGAGC AAGACCGCGC CCGGGAAATC
AGTGAATCCC TTGGGCAATT ACCGCAACAA CAGTCCGAAG CCCGGCGAAT GCTCGCAGAG
ATCGGCCCGC GAATTCAGTC ACAAAGTAAT CCCTCGACGC CCGTCGCCCA AGCTCAGCTT
ACGCTATTGC AAGCTGAAGC GGTGGCTCGT AAAGCCAAAG TCAATGAGTT AGAGCTTTCA
CAACTGTCTG CCAATAACCG GCAGGAGCTG TCCCGGCTAC AAGTCGAATT ATACAAAAAG
CGCGAAGCAC GGGTTCAGGC TCAGCTTCAG TCCCTGCGTA ATAACCTGAA TAATCAACGC
CAACAAGCCG CGGAACAGGC ACTTGAGCGG ACAGAGTTGC TGGCAGAGCA AGGGGGGGAT
TTACCCGAAT CTATCACCCA GCAGTTACAA AGAAACCGTG AGTTATCTCA GGCGCTTAAT
CAGCAGGTAC AGCGGATTGA TCTTATCTCT TCCCAGCAAC GCCAGGCTGT CGCGCAAACT
CAGCAAGTCC GGCAAGCGCT AAACACTATC CGTGAGCAGG CTCAATGGCT TGGGGTCTCA
ACCGCGTTGG GCGAAACCCT ACGAGCGCAG GTCGCCAAGC TGCCAGAAAT GCCCAAATCC
CAACAACTGG ATCGCGATAT GGCACAGTTG CGGGTTCAGC GCTTGCAATA TGAAGATATG
CTGGAAAAAT TACAGCAACA GAAAACCACG TTAAAACAGG ATGATGGCAC CCCGCTCACG
CCCGATCAGC AACGCATTCT GGATGCCCAA TGGCGGACAC AGAGCGAATT ACTGAATTCT
CTGCTTTCAG GCTATGACAC GCAAATTCTG GAACTGACCA AACTGAAAGT GGCTAACAGT
CAGTTAGTTG ACGCATTAAA TGGGGTGCGT GAAGCCACTC ACCGCTATCT GTTCTGGGTG
GCAGATGTCA GCCCTATTTC GCTTTCTTAT CCTCTTGCTG TGGCTCAGGA CCTCACCCGC
CTACTGTCAC TGGATACCTT GTCGCAGTTG AGTGGCGCTT TTGTCATGAT GATGACCAGC
CAGGAAACCC TGCTGCCCAT TATCGCTGCC CTACTGTTTG TCGGTTTCAG TGTTAGCTCA
CGCCGCCACT ACCATGCCTT CCTCGAACGG GCCAGTAGCC GGGTGGGCAA AGTGACACAA
GACCACTTCT CCCTGACGTT ACGCACGGTA TTCTGGTCAA TTCTGATGGC TCTCCCCTTG
CCAGTTTTAT GGGCGGCTCT GGGTTATGGT CTGCAAAATG CCTGGTCATA TCCGATGGCC
ATTGCGATTG GCAATGCCGT CACTGCCACC GTGCCCGTGC TCTGGGTGTT TATGATCAGC
GCCTCGTTTG CTCATCCACA CGGGCTGTTT ATTACTCACT TCCGCTGGTC GCCAACACAA
GTTGCGCGCG CAATGCGTTT TTACCGCCTG TCAATATGGT TAATTGTCCC ATTAATGATG
GCGCTGATTA CGTTTGAAAA TTATAACGAC CGCGAGTTTG CTGGGACACT GGGCCGGCTG
TGCTTTATTT TGCTGTGTAT TGCATTAAGT TTGGTCACAA ACAGCCTGAA ACGGGCCGGT
ATCCCGCTGT ATCTGGATAA AAAAGGTTCG GGCGAGAATA TGATTAACGT GGCGCTGTGG
GGGTTGCTGC TGTCAGCTCC GTTAATTGCA GCGCTGGCCT CAGCATTAGG CTATCTCACC
ACCTCACAAG CGCTGTTGGC ACGTCTGGAG ACCTCGGTCG CTATCTGGTT CTTCCTGTTA
GTGGTCTATC ATATTATCCG CCGTTGGATG CTGATCCAGC GGCGGCGTAT TGCCTTTGAT
CGCGCCAAGC AGCGCCGCGC CGATATTCTC GCGCAGCGCG CCCGTGGTGA GGAAGATTCG
CCACACAGTA ACAGCACTGA AGGCTCGATT GATGTCGAGG AGCCGATCAT TGATTTGGAT
GTGATCAGCG CCCAATCCTT GCGGTTGGTT AGGTCGATCC TGACCATGAT AGCCTTGGTT
TCAGTGATCG TGCTGTGGTC TGAAATTCAT TCCGCTTTTG GCTTCCTGGA AAACATTCGC
TTGTGGGATG TGTCATCCAC CATCAACGGT ATTGAGTCAG TCCAGCCAAT CACCATGGGA
TCTTTATTGA TCGCCGTCTT GGTGCTGATT ATCACCGCCC AGTTGGTGCG TAATCTGCCC
GCCTTACTGG AGCTGGCACT GTTACAGCAT TTGGATCTGA CGCCGGGAAC GGGCTATGCC
ATCTCCACAA TCACCAAATA TCTGGTGATC TTATTTGGTG GTTTGCTTGG GTTCTCCCTG
CTCGGGATTG AATGGGCGAA GTTCCAATGG TTGGTTGCCG CACTCGGTTT AGGTTTGGGT
TTTGGTTTAC AGGAGATTTT TGCCAACTTT GTTTCTGGCC TGATCATTCT GTTCGAAAAA
CCGATCCGGA TTGGCGATAC CGTGACCATT CGTGATCTCA CTGGTAGCGT GACGAAAATC
AATACGCGCG CCACCACGAT TTCCGATTGG GACCGCAAAG AAATTATTGT GCCGAATAAA
GCTTTTATTA CCGAGCAATT TATTAACTGG TCACTCTCGG ATTCCATTAC CCGTGTGGTC
CTCACCGTTC CCGCACCCGC GGAGACCAGC AGTGAGGAAG TCACTAACGT ATTAATGACC
GCGGCCCAGC GCTGCACGTT AGTCTTGGAT ACCCCGCCTC CAGAGGTCTA TCTGGTCGAT
CTACAACAAG GGATTCAGAT TTTCGAACTG CGTATTTATG CCGCTGAAAT GGGCCACCGG
ATGCCACTGC GCCATGAAAT CCATCAGTTG ATTCTGGCCG GCTACCGTGA GCACGGTATT
ACCCTACCAT TCCCACCGTT CCAAGCGCGG TTAGAAACTC TGGGGCGCGG CACTGGACGT
ACGATTTCTT CGGGCCGCAG CCGCACACCG GGTAGTTTGT AA
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| Protein sequence | MRPIISWSFG LLLSFFLLMP LYAATQPNEE QVRQELKLAE SNKTTPNQAE IVQALQGALS
WLADAKESDI RAQQYQKAID DFPKLTRELR QQLAQEGDKP LPVPSNLSTS DLEQQVLQVS
SQLLELNRLS QQEQDRAREI SESLGQLPQQ QSEARRMLAE IGPRIQSQSN PSTPVAQAQL
TLLQAEAVAR KAKVNELELS QLSANNRQEL SRLQVELYKK REARVQAQLQ SLRNNLNNQR
QQAAEQALER TELLAEQGGD LPESITQQLQ RNRELSQALN QQVQRIDLIS SQQRQAVAQT
QQVRQALNTI REQAQWLGVS TALGETLRAQ VAKLPEMPKS QQLDRDMAQL RVQRLQYEDM
LEKLQQQKTT LKQDDGTPLT PDQQRILDAQ WRTQSELLNS LLSGYDTQIL ELTKLKVANS
QLVDALNGVR EATHRYLFWV ADVSPISLSY PLAVAQDLTR LLSLDTLSQL SGAFVMMMTS
QETLLPIIAA LLFVGFSVSS RRHYHAFLER ASSRVGKVTQ DHFSLTLRTV FWSILMALPL
PVLWAALGYG LQNAWSYPMA IAIGNAVTAT VPVLWVFMIS ASFAHPHGLF ITHFRWSPTQ
VARAMRFYRL SIWLIVPLMM ALITFENYND REFAGTLGRL CFILLCIALS LVTNSLKRAG
IPLYLDKKGS GENMINVALW GLLLSAPLIA ALASALGYLT TSQALLARLE TSVAIWFFLL
VVYHIIRRWM LIQRRRIAFD RAKQRRADIL AQRARGEEDS PHSNSTEGSI DVEEPIIDLD
VISAQSLRLV RSILTMIALV SVIVLWSEIH SAFGFLENIR LWDVSSTING IESVQPITMG
SLLIAVLVLI ITAQLVRNLP ALLELALLQH LDLTPGTGYA ISTITKYLVI LFGGLLGFSL
LGIEWAKFQW LVAALGLGLG FGLQEIFANF VSGLIILFEK PIRIGDTVTI RDLTGSVTKI
NTRATTISDW DRKEIIVPNK AFITEQFINW SLSDSITRVV LTVPAPAETS SEEVTNVLMT
AAQRCTLVLD TPPPEVYLVD LQQGIQIFEL RIYAAEMGHR MPLRHEIHQL ILAGYREHGI
TLPFPPFQAR LETLGRGTGR TISSGRSRTP GSL
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