| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3800 |
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| Symbol | miaA |
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| ID | 6089925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4186723 |
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| End bp | 4187664 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641598890 |
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| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
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| Protein accession | YP_001722520 |
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| Protein GI | 170026015 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
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| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.133233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATA TTGAGAATCT AGATCGTCCA CCGGCAATTT TTATTATGGG GCCAACTGCT
TCCGGTAAAA CCGCGCTCTC TATTGCGTTG AGGCAGCGAT TGCCTGTGGA GTTAGTCAGC
GTCGATTCTG CTCTTATCTA CCGTGGCATG GATATCGGTA CCGCGAAACC CAGTGCACAA
GAGCTGGCGT TAGCGCCACA CCGGTTGATT GATATCCGTG ATCCCGCTGA ATCATACTCC
GCTGCCGATT TTCGTAAAGA TGCTCTGAAA GAAATGGCCG ACATCACTGC TGCGGGGCGT
ATTCCGCTGC TAGTGGGGGG GACAATGTTG TATTTTAAAG CGCTGTTGGA TGGGTTATCT
CCGTTACCCT CCGCAGATCC TCAAGTACGC CAGCGTATTG AACAGCAGGC GTCGGAGCTC
GGTTGGGGCG CATTGCACCA GCAATTGGCC GTGATCGATC CAGTCGCGGC GGCACGGATT
CACCCCAATG ATCCCCAAAG GCTCTCCAGA GCACTGGAAG TTTTTTTTAT TTCAGGTAAA
ACTTTAACGG AACTGACTAA AATTTCGGGT GAAACCTTAC CTTACCGGGT TCACCAATTT
GCGATTGCGC CTGCTAGCCG GGAACTGTTG CACCAGCGGA TTGAATTACG TTTTCATCAG
ATGCTGGATG CAGGGTTTGA AGCAGAGGCT AGGGTGCTTT TTGACCGCGG TGATTTGCAT
ACGGACTTGC CTGCCATTCG TTGTGTGGGA TACCGGCAGA TGTGGTCTTA TCTGTCTGGT
GAGATTGATT ACAACGACAT GGTATACCGC GGAGTTTGTG CGACACGTCA ACTGGCAAAG
CGCCAAATGA CCTGGTTGCG GGGCTGGAGT TCAGTTCAAT GGCTCGACAG TGATAAGCCG
GGAGAGGCTT TAGACTCCGT AATACAGGTT GTTAGTGCAT AG
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| Protein sequence | MNDIENLDRP PAIFIMGPTA SGKTALSIAL RQRLPVELVS VDSALIYRGM DIGTAKPSAQ
ELALAPHRLI DIRDPAESYS AADFRKDALK EMADITAAGR IPLLVGGTML YFKALLDGLS
PLPSADPQVR QRIEQQASEL GWGALHQQLA VIDPVAAARI HPNDPQRLSR ALEVFFISGK
TLTELTKISG ETLPYRVHQF AIAPASRELL HQRIELRFHQ MLDAGFEAEA RVLFDRGDLH
TDLPAIRCVG YRQMWSYLSG EIDYNDMVYR GVCATRQLAK RQMTWLRGWS SVQWLDSDKP
GEALDSVIQV VSA
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