Gene YPK_3778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3778 
Symbol 
ID6088771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp4168658 
End bp4169278 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content52% 
IMG OID641598868 
Productpeptidyl-prolyl cis-trans isomerase 
Protein accessionYP_001722498 
Protein GI170025993 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCC CTTCTTTTGA TAGCGTTGAA GCGCAAGCGA GCTACGGGAT TGGTTTACAA 
ATCGGGCAGC AATTACAAGA GTCCGGTCTG CAAGGTTTAT TGCCAGAGGC ATTGTTGGCA 
GGTTTGCGTG ACGCGATGGA AGGGAATACA CCGACTGTCC CTGTTGATGT GATACATCGC 
GCGTTACAAG AAGTGCATGA AAAGGCAGAT AAAGTCCGTG TTGAGCGCCA GCAGGCGTTG 
GTAGACGAAG GCAAAACCTT CCTGGAAGAG AATGCCAAGC GTGATGATGT GACTACCACT 
GAGTCTGGTT TGCAGTTCTC CGTATTGCAG GCAGGTGACG GCCCGATCCC ATCCCGTCAG 
GACCGTGTGC GTGTGCATTA CACCGGACGT TTGGTTGATG GTACGGTATT TGATAGCTCT 
GTTGAGCGTG GTCAGCCAGC CGACTTCCCC GTCAGCGGCG TTATCCCAGG TTGGATCGAA 
GCGCTGTCTA TGATGCCTGT AGGGTCTAAA TGGAAGCTGT ATATTCCGCA CAATCTGGCT 
TATGGCGAGC GTGGTGCTGG TGCAACGATC CCGCCGTTCA GCGCCCTGAT GTTTGAAGTG 
GAACTGTTGG AAATTCTGTA A
 
Protein sequence
MTTPSFDSVE AQASYGIGLQ IGQQLQESGL QGLLPEALLA GLRDAMEGNT PTVPVDVIHR 
ALQEVHEKAD KVRVERQQAL VDEGKTFLEE NAKRDDVTTT ESGLQFSVLQ AGDGPIPSRQ 
DRVRVHYTGR LVDGTVFDSS VERGQPADFP VSGVIPGWIE ALSMMPVGSK WKLYIPHNLA 
YGERGAGATI PPFSALMFEV ELLEIL