Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3761 |
Symbol | |
ID | 6090758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4148676 |
End bp | 4149614 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641598851 |
Product | malate dehydrogenase |
Protein accession | YP_001722481 |
Protein GI | 170025976 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.420142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGTTG CAGTTCTCGG TGCCGCTGGT GGGATTGGCC AGGCCCTCGC TCTTCTACTC AAGACCCAGC TTCCTTCAGG TTCAGACCTC TCTTTATATG ATATCGCGCC AGTAACGCCT GGTGTTGCTG TTGATCTGAG CCATATCCCT ACAGCCGTTA ACATTAAAGG CTTCAGCGGC GAAGATGCTA CACCAGCCCT TCAAGGGGCA GATATTGTGC TGATTTCTGC TGGTGTCGCA CGTAAACCTG GTATGGATCG TTCGGATCTG TTCAACGTCA ATGCGGGCAT TGTTCGTAAT CTGGTTGAGC AAATTGCACG TACTTGCCCG AACGCATTGA TTGGTATCAT CACTAACCCA GTCAACACAA CCGTCGCTAT TGCGGCTGAA GTGCTAAAAA AAGCAGGCGT TTATGACAAG AATAAGCTGT TTGGTATTAC CACTCTGGAT ACCATTCGCT CCAATACCTT TGTTGCCGAA TTAAAAGGTA AGCAACCCCA GGATATCGAA GTGCCGGTTA TTGGTGGCCA CTCTGGTGTG ACTATCTTGC CATTGCTATC ACAGATCCCT GGCGTTAGCT TTACAGAACA AGAAGTTGCA GATTTGACCA AACGTATCCA GAACGCGGGT ACCGAGGTTG TAGAAGCTAA AGCCGGTGGC GGGTCCGCGA CGCTGTCTAT GGGGCAAGCT GCGGCACGTT TTGGTCTTTC TTTGGTACGT GCCCTGCAAG GTGAAAGCAA TGTTGTTGAA TGCTCTTATG TTGAAGGCGA TGGCAAATAT GCCCGCTTCT TTGCTCAGCC TATTCTACTG GGTAAAAACG GTGTCGCTGA ACGTAAAGAT ATCGGTAAAC TGAGTGCTTT TGAGCAACAA GCGCTGGAAA ATATGCTTGA TGTTTTACAC AAAGATATCG AGTTAGGTGA GAAGTTCGTT AATCAATAA
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Protein sequence | MKVAVLGAAG GIGQALALLL KTQLPSGSDL SLYDIAPVTP GVAVDLSHIP TAVNIKGFSG EDATPALQGA DIVLISAGVA RKPGMDRSDL FNVNAGIVRN LVEQIARTCP NALIGIITNP VNTTVAIAAE VLKKAGVYDK NKLFGITTLD TIRSNTFVAE LKGKQPQDIE VPVIGGHSGV TILPLLSQIP GVSFTEQEVA DLTKRIQNAG TEVVEAKAGG GSATLSMGQA AARFGLSLVR ALQGESNVVE CSYVEGDGKY ARFFAQPILL GKNGVAERKD IGKLSAFEQQ ALENMLDVLH KDIELGEKFV NQ
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