Gene YPK_3761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3761 
Symbol 
ID6090758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4148676 
End bp4149614 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content48% 
IMG OID641598851 
Productmalate dehydrogenase 
Protein accessionYP_001722481 
Protein GI170025976 
COG category[C] Energy production and conversion 
COG ID[COG0039] Malate/lactate dehydrogenases 
TIGRFAM ID[TIGR01772] malate dehydrogenase, NAD-dependent 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.420142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTG CAGTTCTCGG TGCCGCTGGT GGGATTGGCC AGGCCCTCGC TCTTCTACTC 
AAGACCCAGC TTCCTTCAGG TTCAGACCTC TCTTTATATG ATATCGCGCC AGTAACGCCT
GGTGTTGCTG TTGATCTGAG CCATATCCCT ACAGCCGTTA ACATTAAAGG CTTCAGCGGC
GAAGATGCTA CACCAGCCCT TCAAGGGGCA GATATTGTGC TGATTTCTGC TGGTGTCGCA
CGTAAACCTG GTATGGATCG TTCGGATCTG TTCAACGTCA ATGCGGGCAT TGTTCGTAAT
CTGGTTGAGC AAATTGCACG TACTTGCCCG AACGCATTGA TTGGTATCAT CACTAACCCA
GTCAACACAA CCGTCGCTAT TGCGGCTGAA GTGCTAAAAA AAGCAGGCGT TTATGACAAG
AATAAGCTGT TTGGTATTAC CACTCTGGAT ACCATTCGCT CCAATACCTT TGTTGCCGAA
TTAAAAGGTA AGCAACCCCA GGATATCGAA GTGCCGGTTA TTGGTGGCCA CTCTGGTGTG
ACTATCTTGC CATTGCTATC ACAGATCCCT GGCGTTAGCT TTACAGAACA AGAAGTTGCA
GATTTGACCA AACGTATCCA GAACGCGGGT ACCGAGGTTG TAGAAGCTAA AGCCGGTGGC
GGGTCCGCGA CGCTGTCTAT GGGGCAAGCT GCGGCACGTT TTGGTCTTTC TTTGGTACGT
GCCCTGCAAG GTGAAAGCAA TGTTGTTGAA TGCTCTTATG TTGAAGGCGA TGGCAAATAT
GCCCGCTTCT TTGCTCAGCC TATTCTACTG GGTAAAAACG GTGTCGCTGA ACGTAAAGAT
ATCGGTAAAC TGAGTGCTTT TGAGCAACAA GCGCTGGAAA ATATGCTTGA TGTTTTACAC
AAAGATATCG AGTTAGGTGA GAAGTTCGTT AATCAATAA
 
Protein sequence
MKVAVLGAAG GIGQALALLL KTQLPSGSDL SLYDIAPVTP GVAVDLSHIP TAVNIKGFSG 
EDATPALQGA DIVLISAGVA RKPGMDRSDL FNVNAGIVRN LVEQIARTCP NALIGIITNP
VNTTVAIAAE VLKKAGVYDK NKLFGITTLD TIRSNTFVAE LKGKQPQDIE VPVIGGHSGV
TILPLLSQIP GVSFTEQEVA DLTKRIQNAG TEVVEAKAGG GSATLSMGQA AARFGLSLVR
ALQGESNVVE CSYVEGDGKY ARFFAQPILL GKNGVAERKD IGKLSAFEQQ ALENMLDVLH
KDIELGEKFV NQ