| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3758 |
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| Symbol | |
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| ID | 6089675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4146368 |
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| End bp | 4147339 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641598848 |
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| Product | octaprenyl diphosphate synthase |
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| Protein accession | YP_001722478 |
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| Protein GI | 170025973 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000253501 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTAG AAAAGATTAT CGAGTTAACC GCGCCAGATA TGGCGGCAGT AAATACAACA
ATTCTCGACC AATTGAACTC TGATGTTGTT CTTATCAATC AATTGGGTCA TTACATTATC
AGCGGTGGTG GAAAACGTAT TCGCCCAATG ATCGCGGTCT TGGTGGCCCG GGCCCTTAAC
TATCAGGGTA GCAAGCATAT CACCGTCGCG GCACTCATCG AGTTTATCCA TACGGCGACA
CTGCTACACG ATGATGTTGT CGATGAATCC GATATGCGGC GTGGCAAAGC GACCGCCAAT
GCCGCATTTG GCAACGCTGC CAGTGTATTG GTCGGCGATT ACATTTATAC GCGCTCATTC
CAGATGATGA CAGGGCTGCA ATCAATGCGA GTGCTGACAT TGATGTCTGA AGCGACAAAC
GTTATCGCCG AAGGTGAGGT ATTACAGTTA ATGAACTGTA ATAACCCAGA CATCACTGAA
GAAAGCTATA TGCAGGTCAT TTACAGCAAA ACAGCACGCT TATTCGAGGC CGCTGCACAA
TCTGCCGCAA TATTGTCAGA TGCCAGTGAG GAGCAGGAAC TGGCATTACA GAACTATGGT
CGTTATCTGG GGACTGCCTT CCAGCTTATT GATGATCTAC TGGATTACAG CGCAGAGGGT
TCCACGTTAG GCAAAAATAC GGGGGATGAC CTGAATGAAG GTAAACCGAC GTTGCCACTG
CTACATGCCA TGCATAATGG CACCCCAGAA CAAGCCGCAA TGATCCGGCA AGCGATTGAA
CAGGGGAATG GCCGTCATTT ACTCGAACCA GTGCTGGCTG CCATGGAGCA TTGTGGCTCT
CTGGTCTATA CCCGTCAGCG TGCTGAAGAA GAAGCAGATA AAGCGATTGC CGCATTGCAC
GCGTTACCTG AAAGTGATTA TCGTCTGGCC CTTGAAGGCT TGGCACATAT CTCAGTGCAC
CGCCGTTTTT GA
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| Protein sequence | MNLEKIIELT APDMAAVNTT ILDQLNSDVV LINQLGHYII SGGGKRIRPM IAVLVARALN
YQGSKHITVA ALIEFIHTAT LLHDDVVDES DMRRGKATAN AAFGNAASVL VGDYIYTRSF
QMMTGLQSMR VLTLMSEATN VIAEGEVLQL MNCNNPDITE ESYMQVIYSK TARLFEAAAQ
SAAILSDASE EQELALQNYG RYLGTAFQLI DDLLDYSAEG STLGKNTGDD LNEGKPTLPL
LHAMHNGTPE QAAMIRQAIE QGNGRHLLEP VLAAMEHCGS LVYTRQRAEE EADKAIAALH
ALPESDYRLA LEGLAHISVH RRF
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