| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3726 |
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| Symbol | |
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| ID | 6087993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4116257 |
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| End bp | 4118374 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641598814 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001722446 |
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| Protein GI | 170025941 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0042224 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCTGACTC CGATTATTCG TAAATTCCAG TATGGTCAAC ATACCGTAAC TATCGAAACT
GGTATGATGG CTCGCCAGGC CACTGCAGCC GTAATGGTAA GCATGGACGA CACTGCAGTA
TTCGTGACTG TTGTTGGTCA AAAGAAAGCC AAACCAGGCC AGAGTTTCTT CCCTCTGACG
GTTAACTATC AGGAGCGTAC TTACGCTGCT GGCCGTATCC CAGGTAGCTT CTTCCGTCGT
GAAGGCCGCC CAAGTGAAGG CGAAACACTG ACTTCACGTC TGATCGACCG CCCAATTCGC
CCACTGTTCC CAGACAGCTT CCTGAACGAA GTTCAAGTGA TTGCAACCGT CGTTTCGGTT
AACCCACAAA TTAACCCAGA CATCGTGGCA CTGATTGGTG CATCTGCGGC ACTGAGCTTG
TCAGGCATTC CATTTAACGG CCCAATCGGT GCTGCTCGCG TTGGTTTTAT CAACGACCAG
TATGTGCTGA ACCCAACCAC TGACGAGCTG AAAGAGAGCC GTTTGGATCT GGTTGTTGCC
GGTACTGCGG GTGCAGTGCT GATGGTTGAA TCAGAAGCCG ATATTCTGTC CGAAGAGCAA
ATGTTGGGCG CGGTCGTCTT CGGCCACGAA CAACAGCAAG TTGTGATTGA AAATATTAAC
GCTTTGGTTG CTGAAGCTGG TAAACCTAAG TGGGATTGGC AGGCAGAGCC TGTCAACGAA
GCACTGCATG CGCGTGTTGC TGAACTGGCC GAAGCGCGTC TGGGCGATGC ATACCGTATC
ACTGAAAAAC AAGAACGTTA TACGCAAGTT GATGCTATCA AAGCTGACGT GACCGAAGCG
CTATTAGCGC AGGACGACAC ATTAGATGCC GCTGAAATTC AGGATATCCT GGCCAGCGTT
GAGAAAAATG TTGTGCGTAG CCGTGTGCTG CGTGGTGAGC CACGTATTGA TGGTCGCGAA
AAAGACATGA TCCGTGGTTT GGATGTACGT ACTGGCATCT TGCCACGTAC TCATGGTTCT
GCCTTGTTCA CCCGCGGTGA AACTCAAGCG TTGGTTACCG CTACGCTGGG TACGGCACGT
GACGCACAAA ACATTGATGA GTTGATGGGT GAGCGCACAG ATTCATTCCT GTTACACTAT
AATTTCCCTC CGTATTGTGT AGGCGAAACA GGGATGGTTG GCTCACCTAA GCGTCGTGAG
ATCGGCCATG GCCGCCTGGC GAAACGTGGT GTTCTGGCTG TGATGCCAAG TGCGAGCGAG
TTCCCTTACA CTATTCGTGT GGTTTCTGAA ATCACCGAGT CTAATGGTTC TTCCTCAATG
GCTTCTGTTT GTGGTGCTTC TCTGGCTCTG ATGGATGCGG GCGTGCCAAT TAAAGCCGCT
GTTGCTGGTA TTGCAATGGG CCTGGTAAAA GAGGGTGATA ACTTTGTCGT TCTGTCTGAC
ATTCTGGGTG ACGAAGATCA CTTGGGCGAC ATGGACTTTA AAGTAGCCGG TAGCCGTGAC
GGTGTGACCG CACTGCAAAT GGACATTAAA ATTGAAGGTA TTACCCGCGA AATTATGCAG
GTAGCTCTGA ATCAGGCTAA GGGTGCACGT TTGCACATTC TGGGCGTGAT GGAACAGGCT
ATCAGCACAC CACGTGGCGA TATCTCTGAG TTTGCTCCAC GTATCTACAC CATGAAGATC
AACCCTGAGA AAATCAAGGA TGTGATCGGT AAAGGTGGTT CGGTGATCCG TGCGCTGACT
GATGAAACTG GCACCACGAT TGAAATCGAA GATGATGGTA CCATTAAGAT TGCAGCAACT
GATGGCGATA AAGCAAAACA CGCTATCCGT CGTATCGAAG AGATTACTGC TGAAATCGAA
GTGGGCCGTA TTTACGCAGG TAAAGTCACT CGTATCGTTG ATTTCGGTGC ATTTGTTGCT
ATCGGTGGCG GTAAAGAAGG TCTGGTACAT ATTTCTCAAA TCGCTGATAA GCGTGTAGAG
AAAGTGACAG ACTACCTGCA GATGGGTCAA GATGTGCCAG TTAAAGTAAT GGAAGTTGAT
CGTCAGGGCC GTATCCGCCT GAGCATCAAA GAAGCCACTA CTCCTGACGC AGAAGCACCA
GAAGCAGCAG CAGAGTAA
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| Protein sequence | MLTPIIRKFQ YGQHTVTIET GMMARQATAA VMVSMDDTAV FVTVVGQKKA KPGQSFFPLT
VNYQERTYAA GRIPGSFFRR EGRPSEGETL TSRLIDRPIR PLFPDSFLNE VQVIATVVSV
NPQINPDIVA LIGASAALSL SGIPFNGPIG AARVGFINDQ YVLNPTTDEL KESRLDLVVA
GTAGAVLMVE SEADILSEEQ MLGAVVFGHE QQQVVIENIN ALVAEAGKPK WDWQAEPVNE
ALHARVAELA EARLGDAYRI TEKQERYTQV DAIKADVTEA LLAQDDTLDA AEIQDILASV
EKNVVRSRVL RGEPRIDGRE KDMIRGLDVR TGILPRTHGS ALFTRGETQA LVTATLGTAR
DAQNIDELMG ERTDSFLLHY NFPPYCVGET GMVGSPKRRE IGHGRLAKRG VLAVMPSASE
FPYTIRVVSE ITESNGSSSM ASVCGASLAL MDAGVPIKAA VAGIAMGLVK EGDNFVVLSD
ILGDEDHLGD MDFKVAGSRD GVTALQMDIK IEGITREIMQ VALNQAKGAR LHILGVMEQA
ISTPRGDISE FAPRIYTMKI NPEKIKDVIG KGGSVIRALT DETGTTIEIE DDGTIKIAAT
DGDKAKHAIR RIEEITAEIE VGRIYAGKVT RIVDFGAFVA IGGGKEGLVH ISQIADKRVE
KVTDYLQMGQ DVPVKVMEVD RQGRIRLSIK EATTPDAEAP EAAAE
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