Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3725 |
Symbol | |
ID | 6091359 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4115248 |
End bp | 4116132 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641598813 |
Product | lipoprotein NlpI |
Protein accession | YP_001722445 |
Protein GI | 170025940 |
COG category | [R] General function prediction only |
COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.38632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCTT TCTTGCGCTG GTGTTACGTT GCGACAGCAC TCATGCTGGC AGGATGCAGC AACCATGATT GGCGTAAAGA CGAGGTTTTG GCAATCCCGT TGCAACCAAC GTTACAGCAG GAAGTGATTC TGGCACGCAT GGAACAAATC CTTGCAAGTC GGGCACTTAC GGATGATGAG CGCGCGCAGC TTTTATATGA GCGCGGAGTG CTGTATGATA GCCTCGGGCT ACGGGCACTA GCGCGAAATG ATTTTTCGCA AGCGTTAGCT ATTCGTCCTG ATATGCCAGA GGTTTTTAAC TATCTTGGCA TATATTTAAC GCAGGCAGGC AATTTTGATG CTGCCTATGA AGCGTTTGAT TCTGTACTAG AGCTTGATCC AACTTACAAT TACGCGCGTT TAAACCGGGG TATCGCCTTG TATTATGGCG GTCGATTCCC GTTGGCGCAG GATGATCTGC AGGCGTTTTA TCAAGACGAT CCAAATGATC CCTTCCGTTC ATTATGGCTG TATCTGGTGG AAAGAGAAAT CGATCCTAAA GCAGCTGTAG TAGCGTTACA ACAACGCTAT GAAAAATCGG ACAGAGGGCA ATGGGGATGG AATATTGTCG AATTCTACCT GGGCAAGATC AGCGAAAAAT CGCTGATGGA AAGGCTCAAG GCAGATGCAA CGGATAACAC TTCGCTCGCT GAGCATCTCA GTGAAACTGA CTTCTATTTA GGTAAACATT ACCTAAGTCT GGGGGACAAG AACACCGCTT CGGTGCTGTT CAAACTGACG GTAGCTAACA ACGTTCATAA CTTTGTTGAG CACCGCTATG CATTGTTGGA ATTGGCACTT TTGGGCCAAG AACAAGACGA CCTATCGGAA TCGGACCAGC AATAG
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Protein sequence | MKPFLRWCYV ATALMLAGCS NHDWRKDEVL AIPLQPTLQQ EVILARMEQI LASRALTDDE RAQLLYERGV LYDSLGLRAL ARNDFSQALA IRPDMPEVFN YLGIYLTQAG NFDAAYEAFD SVLELDPTYN YARLNRGIAL YYGGRFPLAQ DDLQAFYQDD PNDPFRSLWL YLVEREIDPK AAVVALQQRY EKSDRGQWGW NIVEFYLGKI SEKSLMERLK ADATDNTSLA EHLSETDFYL GKHYLSLGDK NTASVLFKLT VANNVHNFVE HRYALLELAL LGQEQDDLSE SDQQ
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