Gene YPK_3712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3712 
Symbol 
ID6089410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4100791 
End bp4101078 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content52% 
IMG OID641598800 
ProductGIY-YIG nuclease superfamily protein 
Protein accessionYP_001722432 
Protein GI170025927 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGATA GCCTTTGGCA TCTCTATTTG CTGCGTACCG CCAGTGGCAT GCTCTATACC 
GGTATTACCA CCGATGTAGC ACGGCGGTTG GCACAGCATC AGGCGGGGAA AGGGGCAAAA
GCGCTGCGGG GCAAAGGGGA GTTAACGTTG GTATTTCATT GTGAAGCGGG CGACCGTTCG
ACCGCCTTAA AGCTGGAGTA CCGCGTCAAG CAGCTCAGTA AACAGCAAAA AGAAAAGCTG
GTGATTGACC AGCCAAGGTT ATTGACAACG CTATTTTTAG CCTCGTGA
 
Protein sequence
MSDSLWHLYL LRTASGMLYT GITTDVARRL AQHQAGKGAK ALRGKGELTL VFHCEAGDRS 
TALKLEYRVK QLSKQQKEKL VIDQPRLLTT LFLAS