Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3699 |
Symbol | |
ID | 6090534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4086803 |
End bp | 4087522 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641598787 |
Product | phosphonate C-P lyase system protein PhnL |
Protein accession | YP_001722419 |
Protein GI | 170025914 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4778] ABC-type phosphonate transport system, ATPase component |
TIGRFAM ID | [TIGR02324] phosphonate C-P lyase system protein PhnL |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCCC TACAACTCCG GGTTGAAAAT ATCAGCAAAA CCTTCGTGCT CCACCACCAG CACGGTATTC GTCTGCCGGT ACTGCATCAA ATATCACTGG AGGTGAACCG CGGTGAATGT GTCGTGCTAC ACGGCCATTC CGGGAGTGGA AAATCCACAC TGCTACGCTC CCTCTATGCC AACTATCTGC CTGACAGCGG CCATATCTGG ATCAAACATC AGGGAGAATG GATCGATATC GTGGCCGCCG AAGCCCGACA AATTATGGCC GTGCGTCACC ATACCGTCGG TTGGGTCAGT CAGTTCTTGC GGGTGATCCC ACGGATTAGT GCATTAAATG TGGTGATGCA GCCCCTATTA GAACTGGGCG TTGATCGGCA CACCTGCCAA CAACGGGCGC AGGACCTGCT AACCCGTCTC AATGTCCCGC CACGCTTGTG GGACCTGGCC CCTTCAACGT TTTCTGGCGG CGAACAGCAA CGGGTTAATA TCGCCCGCGG TTTTATTGTG GATTACCCTA TCTTGCTGTT GGATGAACCG ACCGCATCAC TGGACAGCGC TAACAGCGCA GCCGTGGTCA GCCTGATTGA TGAAGCTAAA CAACGCGGTG CCGCGATTGT CGGGATTTTC CACGATGAGA GTGTGCGTAA CCATGTCAGT GATCGTTTAC TTACCATGAC GCCCGCCCCC TCAGAGATCC GCACGGAGAT CCCTGTATGA
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Protein sequence | MNPLQLRVEN ISKTFVLHHQ HGIRLPVLHQ ISLEVNRGEC VVLHGHSGSG KSTLLRSLYA NYLPDSGHIW IKHQGEWIDI VAAEARQIMA VRHHTVGWVS QFLRVIPRIS ALNVVMQPLL ELGVDRHTCQ QRAQDLLTRL NVPPRLWDLA PSTFSGGEQQ RVNIARGFIV DYPILLLDEP TASLDSANSA AVVSLIDEAK QRGAAIVGIF HDESVRNHVS DRLLTMTPAP SEIRTEIPV
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