Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3686 |
Symbol | |
ID | 6088368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4073044 |
End bp | 4074612 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641598774 |
Product | extracellular solute-binding protein |
Protein accession | YP_001722406 |
Protein GI | 170025901 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAA AAGTTCTGTC ATTATTCGTT CTGGCAGCGT TATCTGGCGG CACATTGGCA GCAACGCCGC CGGATACGCT GATAGTCGTG CAATCCCTGG ATGACATCGT CAGCCTTGAC CCCGCAGAAA GTAACGAGCT GTCTAGCATT CAGACAGTAC CGAGCCTCTA TCAGCGCTTA GTTCAAGCCG ACCGCGATAA CCCGGCAAAA GTAGTACCCG TCCTGGCCGA AAGCTGGGAA GGCGATGCCG CAGCCAAAAC ATTAACGGTC AAATTGCGTC CACAGGCGGT ATTTGCATCG GGTAATCCGG TACAAGCCGA TGACGTCATT TATTCTTTCA CCCGCGCAGT GAAAATGAAT CGCTCACCTG CTTTTATTCT CAACGTCTTG GGCTGGCAGG CTGATAACAT CGATCAACAC CTAAAGAAAA TTGATAATAA TACCGTGCAA GTAAGCTGGA GTGCAGATGT CAGCCCAGCG GTTGCCTTGA ATATTTTATC AACGCCCATT GCATCCATTG TTGATAAAAA AACCGTGACG GCGAATACCA AAGATGACGA TTACGGTAAT GCGTGGCTCA AAATGCACTC TGCCGGTAGC GGCGCCTTCA AAATGCGGGT TTATCAGCCG CACCAAGCCA TTGTGCTGGA TGCCAACCCT ACGTCACCGG GTAATCAGCC ATTAATTAAG AATATTATTA TTAAAAACGT GCCTGACCCC AGTGCCCGCC GCCTGTTAAT TCAACAAGGT GATGCTGATA TTGCACGGGA ATTAGGGCCG GACCAAATTA CTGCGCTGAA AACACAGGCC GGCGTCAAGG TCGTTGAAAT CCCATCAGCA GAACAAAACT ATTTGGTGTT TAACACCGCT AATGCCGCTA ACCCGCTGCT GAGCAGGCCA GAACTCTGGC AAGCAGCCCG TTATCTGGTG GATTACCAAG GTATTACCAA AGATCTGTTG AAAGATCAGT ATTTCATTCA TCAAAGCTTC CTCCCCGTTG GTTTGCCTGG GGCATTGGCA AGCAATCCAT TCACTTTTGA TCCGGCCACC GCCAAAAAAA TTCTGGCTAA AGCGGGCATT AAAGATGCCA CACTGACACT GGATGTTGAG AACAAACCCC CGTTTATCAC CATTGCTCAG TCGTTACAGG CCAGCTTTGC GCAGGGGGGG GTGAAACTGG TATTGCTGCC AGCAGCAGGT AGCCAAGTTT ATGGTCGGGT GCGGGCTAAA CAGCATCAAT CGGCGATTCG CCTGTGGATC CCGGATTATT TCGATGCACA CTCCAATGCC AGCACCTTCG CTTATAACGA CGGTAAAAGC AGTACGGTGG CGGGCCTAAA CGGCTGGGTT ATTCCTGAAC TGAATAAGCA AACACTGGCT GCCGTCGCTG AAGCAGATCC AGAAAAACGG ACTCAGTTGT ACACCCAGTT ACAGCAGGAA CTGCAGCAAA ACTCGCCTTA TATCTTTATT GATCAAGCCA AAGCACAAGT TGTGTTACGA GATAATGTAA AAGGCTATCA ACAAGGTCTG AATGCCGATA TGGTCTATTA TGATCGTGTC AGTAAATAA
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Protein sequence | MKAKVLSLFV LAALSGGTLA ATPPDTLIVV QSLDDIVSLD PAESNELSSI QTVPSLYQRL VQADRDNPAK VVPVLAESWE GDAAAKTLTV KLRPQAVFAS GNPVQADDVI YSFTRAVKMN RSPAFILNVL GWQADNIDQH LKKIDNNTVQ VSWSADVSPA VALNILSTPI ASIVDKKTVT ANTKDDDYGN AWLKMHSAGS GAFKMRVYQP HQAIVLDANP TSPGNQPLIK NIIIKNVPDP SARRLLIQQG DADIARELGP DQITALKTQA GVKVVEIPSA EQNYLVFNTA NAANPLLSRP ELWQAARYLV DYQGITKDLL KDQYFIHQSF LPVGLPGALA SNPFTFDPAT AKKILAKAGI KDATLTLDVE NKPPFITIAQ SLQASFAQGG VKLVLLPAAG SQVYGRVRAK QHQSAIRLWI PDYFDAHSNA STFAYNDGKS STVAGLNGWV IPELNKQTLA AVAEADPEKR TQLYTQLQQE LQQNSPYIFI DQAKAQVVLR DNVKGYQQGL NADMVYYDRV SK
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