Gene YPK_3685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3685 
Symbol 
ID6089090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4071947 
End bp4072405 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content46% 
IMG OID641598773 
Producthypothetical protein 
Protein accessionYP_001722405 
Protein GI170025900 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2731] Beta-galactosidase, beta subunit 
TIGRFAM ID[TIGR00022] uncharacterized protein, YhcH/YjgK/YiaL family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATCG GAAATATTCA TCATTTGGCA CTGCTGCCTT ATCTGCCAGC CCAATTGCGG 
GACGCCATCG AGTATGTGAA AAGCCATATC AACGCAGATA CCCCATTGGG TAAGCATGAT
ATTGATGGCA ATAATGTGTT CGTGTTGGTT TCCAATGACA GCACTGACTT ATTAGAGAAT
CGCCGTGCGG AATATCACGC CAAGTATTTG GATATCCAAA TTATTTTGGC AGGGCAGGAA
GGGATGGCTT TCAGTAATCT ACCCGCAGGA AAGCCAGATA CCGATTGGTT GGCAGACAAA
GATATTGCCT TCTTACCCGC AGGCACAGAT GAAAAACACG TAGTGCTGCA AACCGGTGAT
TTTGTCGTAT TTTTCCCAGG TGAAGTGCAT AAGCCATTAT GTGCCGTGGG CGAGCCGGCG
AATGTGCGTA AAGCGGTTGT TAAAATAGCG GTGAAATAG
 
Protein sequence
MIIGNIHHLA LLPYLPAQLR DAIEYVKSHI NADTPLGKHD IDGNNVFVLV SNDSTDLLEN 
RRAEYHAKYL DIQIILAGQE GMAFSNLPAG KPDTDWLADK DIAFLPAGTD EKHVVLQTGD
FVVFFPGEVH KPLCAVGEPA NVRKAVVKIA VK