Gene YPK_3678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3678 
Symbol 
ID6090829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4062486 
End bp4063580 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content49% 
IMG OID641598766 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_001722398 
Protein GI170025893 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000432318 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCATCA TTAGATATCT GGTACGGGAA ACCTTAAAAA GCCAAATTGC GATCCTGTTC 
ATCCTGCTAT TAATCTTCTT TAGCCAGAAG TTAGTTCGGA TATTAGGTGC CGCTGTTGAT
GGTGAAATCC CGACAAATGT AGTTTTATCC CTTTTGGGAC TTGGTGTGCC GGAAATGGCA
CAACTCATCT TACCATTGAG CTTATTCCTA GGGCTGCTGA TGACCTTGGG CAAACTGTAC
ACGGAGAGTG AAATCACCGT GATGAATGCC TGTGGCATGG GTAAAAAGTC CTTGATCATG
GCAGCGTTAA TTCTGGCGCT CTTCACCTCC GGGCTGGCAG CCATCAACAC TATCTGGCTT
GGTCCTTGGT CTTCTAAACA TCAAGATGTC GTACTGAACG ATGCCAAAGC CAATCCGAGT
CTGGCCGCGC TTGGCGGTGG GCAGTTTAAA TCTTCAAACG ATGGTAATTC AGCTCTTTTT
ATTGGCAATG TGGCGGGTAA AGAGTTTAAC CGTGTGTTTT TGGCACAATT GCGCCCGAAC
GGTAACCAGC GCCCCTCTGT GGTGGTGGCC GATAGCGGCC ATATGAGTGA GCTCCCGGAC
GGTTCACAAA TGGTTATTCT GAACAAAGGG ACTCGCTATG AAGGCACCGC CTTGCTACGC
GATTTCCGTA TTACTGACTT CGTTGATTAC CAGGCTGTTA TAGGACACAA ACAAGTACAG
CAAAGCAGCA ACGGGGCCGA TCAGATGTCA ATGAAAGAGC TATGGCGCTC TCAAGAACCT
GATGCACGGG CTGAGTTCCA CTGGCGTCTA ACACTGATTG TTTCGGTCGT TATTATGGCA
TTGCTAGTGG TGCCGTTGAG TGTGGTTAAC CCACGCCAGG GTCGTGTCCT GAGTATGCTT
CCGGCTATGT TGCTGTATTT GATTTTCTTC CTGTTACAAA GCTCCCTGCG TTCTAAGGCG
GGTAATGGCC AACTGGATCC ACTGGTCTGG ATGTGGGCTG TTAATGGTGC TTATTTGGCT
CTCGCGATAA TCTTGAACCT GTGGGATGGC CTGATGGCTC GTAAATTACG TGCTCGATTG
AGAGGTGCTG CCTGA
 
Protein sequence
MIIIRYLVRE TLKSQIAILF ILLLIFFSQK LVRILGAAVD GEIPTNVVLS LLGLGVPEMA 
QLILPLSLFL GLLMTLGKLY TESEITVMNA CGMGKKSLIM AALILALFTS GLAAINTIWL
GPWSSKHQDV VLNDAKANPS LAALGGGQFK SSNDGNSALF IGNVAGKEFN RVFLAQLRPN
GNQRPSVVVA DSGHMSELPD GSQMVILNKG TRYEGTALLR DFRITDFVDY QAVIGHKQVQ
QSSNGADQMS MKELWRSQEP DARAEFHWRL TLIVSVVIMA LLVVPLSVVN PRQGRVLSML
PAMLLYLIFF LLQSSLRSKA GNGQLDPLVW MWAVNGAYLA LAIILNLWDG LMARKLRARL
RGAA