Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3677 |
Symbol | |
ID | 6087725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4061410 |
End bp | 4062486 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641598765 |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_001722397 |
Protein GI | 170025892 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00250895 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGGTG TATTAGACCG CTATATCGGA CGGACTATCC TCAATACTAT CCTGATGACG TTATTAATGT TGGTGTCGCT GTCGGGCATC ATCAAGTTTG TCGATCAACT GCGTAAAGTC GGGCAGGGGG ACTACTCGGC GGCCTCTGCG GGTATGTACA CTATCCTGAG CATCCCAAAG GACATCGCGG TTTTCTTCCC GATGGCGGCC CTCTTAGGGG CATTACTGGG GCTTGGGACT TTAGCCAGTC GCAGTGAGTT GGTAGTTATG CAAGCGTCAG GTTTTACCCG GATGCAAATC GCAGCGTCAG TGATGAAAAC GGCAATCCCT CTGGTGTTGC TGACGATGGC TATCGGTGAG TGGGTGGCAC CGCAAGGTGA GCAGACCGCG CGTAATTTCC GGACACAGCA GATGTACGGT GGTTCGTTAC TCTCAACTCA GTCGGGTTTA TGGGCGAAAG ATGGCTCTGA CTTTATTTAT ATTCAGCGGG TGTCTGGCGA AAGCGAGTTG ACGGGTGTCA ATATTTATCA TTTTGATAAA GAAGATCGTC TGCTTTCGGT GCGGTATGCG GCGACGGCGA CCTATGAAAA AGACAATAAA ACCTGGCGGT TATCGCAGGT CGATGAATCT GATTTAAGTA ATCCTACTCA GGTGACAGGT TCACAGACGC TGACCGGCGA GTGGAAGACC AATCTGACGC CTGAGAAGTT GGGTGTGGTG GCGATGGATC CAGATTCGCT CTCCATTAGC GGGTTGCACG ACTACAGTAA ATATCTACAG CAAAGTGGTC AAGAGTCTAA CCGCTACGAA CTGAGTATGT GGAGCAAGGT ATTTGCTCCC TTCTCTGTTG CGGTCATGAT GCTGATGGCG CTGTCGTTTA TTTTTGGCCC ATTGCGCAGC GTGCCAATGG GTGTTCGGGT GGTCACCGGT ATTTTCTTCG GCTTTGTTTT CTACGTGCTG GATCAAGTTT TTGGTCGACT TAGCTTGGTT TATGGCATCC CACCAATGCT GGGTGCGCTG TTGCCGAGTA TGTTATTCCT CCTGATCAGC ATTTGTTTGC TGCTAAAACG GCGGTAA
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Protein sequence | MFGVLDRYIG RTILNTILMT LLMLVSLSGI IKFVDQLRKV GQGDYSAASA GMYTILSIPK DIAVFFPMAA LLGALLGLGT LASRSELVVM QASGFTRMQI AASVMKTAIP LVLLTMAIGE WVAPQGEQTA RNFRTQQMYG GSLLSTQSGL WAKDGSDFIY IQRVSGESEL TGVNIYHFDK EDRLLSVRYA ATATYEKDNK TWRLSQVDES DLSNPTQVTG SQTLTGEWKT NLTPEKLGVV AMDPDSLSIS GLHDYSKYLQ QSGQESNRYE LSMWSKVFAP FSVAVMMLMA LSFIFGPLRS VPMGVRVVTG IFFGFVFYVL DQVFGRLSLV YGIPPMLGAL LPSMLFLLIS ICLLLKRR
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