| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3676 |
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| Symbol | |
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| ID | 6089711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4059757 |
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| End bp | 4061022 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641598763 |
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| Product | integrase family protein |
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| Protein accession | YP_001722396 |
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| Protein GI | 170025891 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.329272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCTGA GTGATGTGAA GGTTCGTACA GCCAAGCCTG AAGCAAAAGC CTATAAACTT
ACCGACGGCG AAGGCATGGT GTTACTGGTT CACCCTAACG GCTCAAAGTA CTGGCGGCTG
CGATATCGCT TTGGTGGTAA AGAGAAGATG CTGGCGCTAG GGAAGTACCC TGAAATATCG
TTGGCTGATG CCAGGGCGCG GCGTGACGAA GCTCGTAAGC TGTTAGCTAA CGGTGTGGAC
CCAAGTGAGA GCAAGAAAGC CGTTAAGGTA GAGCAGGAGC AAGAAGCGAT AACTTTTGAA
GTGGTAGCCA GAGAGTGGCA TGCCAGTAAT CGTCAATGGT CAGAAGCTCA CAGTGCTCGA
GTGCTCAAAA GCTTAGAGGA CAATCTCTTT CAAGCCATAG GCAAACGGAA TATTGCAGAC
CTCGGAACTC GTGATCTTTT ACCTCCAATT AAAGCCGTGG AGATGTCTGG ACGTCTTGAG
GTGGCTTCCC GCCTGCAACA ACGAACAACA GCGATAATGC GCTATGCCGT TCAAAGCGGT
TTAATTGATT ACAACCCTGC GCAGGAGATG GCGGGCGCTG TTGCTACCGG TAAAAGAAAG
CACCGTGCTG CACTTGAGTT AAACCGTGTT TCAGAGTTAC TTCATCGCAT CGATTACTAC
AGTGGCAGGC CATTAACCCG GCTAGCAGTA GAATTGACTT TATTGGTCTT CATCCGTTCC
AGTGAATTAC GTTTCGCCCG TTGGTCAGAA GTAGATTTTG AAACCGCCAT GTGGACCATC
CCCGGAGAAC GTGAACCACT GGAAGGTGTT AAACATTCGC ACCGGGGCTC AAAAATGCGC
ACTCCTCACC TTGTCCCCTT ATCCCGCCAG GCTCTCGCCA TTCTGGGAAA GATCAAAAGC
ATGAGTGGAA ATCGTGAGCT GATCTTTATC GGTGATCACG ACCCACGTAA GCCCATGAGT
GAGAACACGG TGAACAAGGC TCTACGCGTT ATGGGATATG ACACAAAGGT TGAAGTCTGT
GGCCACGGTT TCAGAACCAT GGCTTGTAGT TCATTGATTG AGTCGGGATT GTGGTCTAGG
GATGCAGTAG AACGGCAGAT GAGCCATCAG GAGCGCAACT CTGTACGTGC GGCTTATATT
CATAAAGCCG AGCACCTAGA TGAGCGCAGA CTGATGATCC AGTGGTGGGC AGATGATCTT
GATGCAAACA GGCAGCAAGC TATCTCACCT TTTGATTATG CAAAAGTAAA TAATCTATTC
AAATAA
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| Protein sequence | MALSDVKVRT AKPEAKAYKL TDGEGMVLLV HPNGSKYWRL RYRFGGKEKM LALGKYPEIS
LADARARRDE ARKLLANGVD PSESKKAVKV EQEQEAITFE VVAREWHASN RQWSEAHSAR
VLKSLEDNLF QAIGKRNIAD LGTRDLLPPI KAVEMSGRLE VASRLQQRTT AIMRYAVQSG
LIDYNPAQEM AGAVATGKRK HRAALELNRV SELLHRIDYY SGRPLTRLAV ELTLLVFIRS
SELRFARWSE VDFETAMWTI PGEREPLEGV KHSHRGSKMR TPHLVPLSRQ ALAILGKIKS
MSGNRELIFI GDHDPRKPMS ENTVNKALRV MGYDTKVEVC GHGFRTMACS SLIESGLWSR
DAVERQMSHQ ERNSVRAAYI HKAEHLDERR LMIQWWADDL DANRQQAISP FDYAKVNNLF
K
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