Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3643 |
Symbol | |
ID | 6090355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4021994 |
End bp | 4023076 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641598730 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001722363 |
Protein GI | 170025858 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGATAA AAACAGTAGT CACTCTGCTC ATTACGTTCC TTCTCGCCGC CTGCGACAGA ACGCCTCCTG AAACCGTCGA AAGTGTGCGC CCAGTAAAAA TCTTTATGGT GGAAGACAGC GGGCAAAATG GTACCCGTTA TTTCCCGGCC AGGCTGCAAG CGGGTGATGA AACCCAACTC TCCTTTAAAC GGGGCGGGCA ACTGCAAGAG TTGTTGGTCC GTGAAGGGGA ACAGGTGAAG AAAGGGCAAA AAATTGCCAT GTTGAACGAT ACTGATTTGA GTTTAAGAGT CAGGGATCGT CAATCAACCT TCAATCTGGC CCGCGATCAG TTTAATCGCT TTAACACCTT GCAAGGCCGC AGCGCCGTCT CGCGTGCCGA TCTGGATATT CGCCGTGCAG AGATGGAGTC AGCGCAAGCG GCTTTAGACA TTGCGCGTAA AGAGCTCAGC GATGCGACAA TTATCGCACC TTTCGATGGC ATCATTGCCA ATGTGAATGT ACGTAATCAC CAAGTTATGG CCGCTGGTCA GCCGGTTGCC ACCTTGAGTG CGCTGGATAC GTTGGATGTG GTATTCAGTG TTCCAGAGCG TCTGTTTACC ACGCTGGACA TCAGCAACCG TAACTACAAG CCAACGGTAT TACTGAACCA TATGCCAGGG CGTGAGTTTA TTGCTGAATA TAAAGAACAC ACCACTTCGA CGACCTCTGC TTCACAGACT TTCCAGGTCA CGCTGACGAT GAAACGCCCA GCAGATATGC CATTGCTTTC CGGTATCAGT GGCCGGGTCA GAATTAACTC CGGCAATTTG TCTGGCACCG ACCATCCAAC CATTATCGTT CCGGTGGAAG CCGTATTTAA CCCCGACCAT GCGCAGTTGA ATGATGCCCG AGTGTGGGTC ATTAAGAATG ATAATGACCA AATGCACGTA GAAGAACGCA AAGTGCAGGT GGGGCAACTC GTGGAAAACG GTATTCAAGT GACCTCTGGC CTGGCTGATG GCGAACAAAT TGTTGCCGCA GGTACCGGTG AGCTTCGCCC ACAACAAGTT GTCCGGGCTT GGGTTCGTGA GCGAGGTCTC TAA
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Protein sequence | MKIKTVVTLL ITFLLAACDR TPPETVESVR PVKIFMVEDS GQNGTRYFPA RLQAGDETQL SFKRGGQLQE LLVREGEQVK KGQKIAMLND TDLSLRVRDR QSTFNLARDQ FNRFNTLQGR SAVSRADLDI RRAEMESAQA ALDIARKELS DATIIAPFDG IIANVNVRNH QVMAAGQPVA TLSALDTLDV VFSVPERLFT TLDISNRNYK PTVLLNHMPG REFIAEYKEH TTSTTSASQT FQVTLTMKRP ADMPLLSGIS GRVRINSGNL SGTDHPTIIV PVEAVFNPDH AQLNDARVWV IKNDNDQMHV EERKVQVGQL VENGIQVTSG LADGEQIVAA GTGELRPQQV VRAWVRERGL
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