| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3636 |
|---|
| Symbol | rsmC |
|---|
| ID | 6090052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 4012115 |
|---|
| End bp | 4013158 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641598720 |
|---|
| Product | 16S ribosomal RNA m2G1207 methyltransferase |
|---|
| Protein accession | YP_001722356 |
|---|
| Protein GI | 170025851 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGCAT TAACCCCAGC CAGTGAAGTG ATACTGCGCC ATAGTGATGA ATTTATAGCC
CGCCACGTCC TGTTTGCCGG TGATTTACAA GATGCGCTGC CAGCGCAATT TGATGCAGCC
GGGGTGCGGG TTCACACCAA TCAATATCAC CACTGGCAAT TACTGAGCAA CACGCTGGAA
GAGAATGTGC AATTCGGTCT TTTAGCCACG GCAGAAACTC TCGCAGCTTG CGACACCCTG
ATTTACTACT GGCCCAAAAG CAAACAAGAA GCCCAATTCC AGTTGGCTAA CCTGCTTTCT
ATACTGCCTG TTGGCACCGA TATTTTTGTT GTGGGTGAAA ACCGCAGTGG TGTACGCAGC
GCAGAAGAAA TGTTGGCAGA CTTCGCGCAG TTAGCCAAGA TAGACAGCGC TCGCCGCTGT
GGTTTATACC ATGGCCGTTT AGACAAACAA CCCGAGTTTG ATGCTGATGC CTGGTGGGAA
AGCTATCAGG TCGGTGGTGT GACGGTCAAA ACATTGCCGG GTGTCTTCAG CCGCGATTCT
CTGGATTCGG GTAGTCATCT GTTGCTGTCC ACCTTTAACG AGCCCTTTAA AGGCAGCGTA
TTGGATGTCG GTTGTGGTGC TGGAGTATTA GCCTCGGTTC TGGCGCAGCA ATCGCCAAAA
ATCAAATGGA CGTTGAGTGA TGTCAGTGCC GCAGCCATTG AAGCCAGCCG AGCCACATTG
GCGGTGAATA ATATTGAGGC GCAAGTGATT GCCAGTAACG TCTATTCCGA CATCAAAGGC
CGCTTTGAGA TGATCATTTC GAACCCGCCT TTCCATGATG GGATCCAAAC CAGCCTGACC
GCCGCTGAGA TGCTGATCCG TGGAGCGACC GCCCACCTAC ATGTGGGGGG GAAATTACGC
ATCGTAGCGA ACTCCTTCCT GCCGTATCCT GCCTTGCTGG ATGCCGCATT TGGTAGCCAC
GAAGTGCTGG CACAGAATGG CCGCTTTAAA GTGTATCAGG CAACTGTCGG GCGTCCGCCA
CGGGATCCGA AGAAAAAACG TTAA
|
|---|
| Protein sequence | MSALTPASEV ILRHSDEFIA RHVLFAGDLQ DALPAQFDAA GVRVHTNQYH HWQLLSNTLE
ENVQFGLLAT AETLAACDTL IYYWPKSKQE AQFQLANLLS ILPVGTDIFV VGENRSGVRS
AEEMLADFAQ LAKIDSARRC GLYHGRLDKQ PEFDADAWWE SYQVGGVTVK TLPGVFSRDS
LDSGSHLLLS TFNEPFKGSV LDVGCGAGVL ASVLAQQSPK IKWTLSDVSA AAIEASRATL
AVNNIEAQVI ASNVYSDIKG RFEMIISNPP FHDGIQTSLT AAEMLIRGAT AHLHVGGKLR
IVANSFLPYP ALLDAAFGSH EVLAQNGRFK VYQATVGRPP RDPKKKR
|
|---|
| |