| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3629 |
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| Symbol | |
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| ID | 6089708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4005964 |
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| End bp | 4006773 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641598713 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001722349 |
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| Protein GI | 170025844 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.978125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAACGC CAGATAAGCC GATGCCGTAT TTTATCGATA CCCACTGTCA TTTTGACTTC
CCTCCGTTCA CCGGTGATGA AGCCGCGAGT TTAGCCTGTG CGGCAGAGGC GAATGTCAGG
CAATTGATCG TTCCTTCGGT CAAGGCCGCA TATTTCTCCC GTATTTTGGC ATTAGCCGAT
CGTTATCCCC CATTGTTTGC GGCTCTTGGC TTACACCCCC TGTATATTGC CGAACATGAG
GATGCCGATC TGGCGGCACT GGCATCGCAT CTGGCAGATA AGCCACCGAA ATTGGTCGCA
ATAGGGGAGA TTGGCCTCGA TCTGTATATG GATGAACCGC AGTTTCCACA TCAGTTAGTG
ATCCTGAATA TGCAGCTTGA ACTGGCCAAA CAGCATGATT TGCCGGTTAT TTTGCATTCA
CGCCGCTCAC ACGATCCACT GGCTGCAGCA TTGCGTAAAG CCGCGTTGCC GCGCGCGGGT
GTGATACATG GTTTTGCGGG CAGCTTAGCG CAGGCGCAAG CCTTTATTCG CCTGGGTTAT
TACATTGGTG TGGGGGGGAC CATCACTTAT AAGCGAGCGC AGAAAACCCG TCATGTTATG
GCCTCATTGC CGCTCTCCTC GTTGCTCTTA GAAACCGATG CACCCGATAT GCCTCTGGCG
AGTTTTCAAG GGCAAGCCAA TCGCCCTGAA CGAGCCGCCA ATGTGTTTGC CGCCTTGTGT
GAGTTGCGCC CAGAGCCAGC CGATGAGATT GCGGCTGAGT TGATGTGTAA TAGCCAGCGT
TTATTTTCCC TTCCTCCCCT TCGTCCTTGA
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| Protein sequence | MRTPDKPMPY FIDTHCHFDF PPFTGDEAAS LACAAEANVR QLIVPSVKAA YFSRILALAD
RYPPLFAALG LHPLYIAEHE DADLAALASH LADKPPKLVA IGEIGLDLYM DEPQFPHQLV
ILNMQLELAK QHDLPVILHS RRSHDPLAAA LRKAALPRAG VIHGFAGSLA QAQAFIRLGY
YIGVGGTITY KRAQKTRHVM ASLPLSSLLL ETDAPDMPLA SFQGQANRPE RAANVFAALC
ELRPEPADEI AAELMCNSQR LFSLPPLRP
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