Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3624 |
Symbol | deoD |
ID | 6089339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3999098 |
End bp | 3999817 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641598708 |
Product | purine nucleoside phosphorylase |
Protein accession | YP_001722344 |
Protein GI | 170025839 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0813] Purine-nucleoside phosphorylase |
TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACGC CACATATTAA TGCTGAAATG GGTGATTTCG CCGACGTTGT ATTGATGCCA GGGGACCCAC TGCGGGCAAA GTTTATTGCA GAAACTTTCC TGCAAGACGT GCGTGAAGTG AATAACGTAC GCGGCATGTT GGGTTTCACC GGCACCTATA AAGGCCGGAA GATTTCTGTG ATGGGCCATG GCATGGGGAT CCCATCCTGT TCTATCTATG CTAAAGAGCT GATCACTGAT TTTGGTGTGA AGAAAATCAT CCGCGTGGGC TCCTGTGGTG CCGTGCGCAC CGATGTTAAA CTGCGTGATG TAGTGATCGG GATGGGGGCG TGCACGGATT CCAAAGTTAA CCGTATGCGT TTTAAAGATC ACGACTATGC GGCGATTGCT GATTTTGAGA TGACCCGTAA TGCGGTTGAT GCAGCCAAAG CGAAAGGGGT CAATGTCCGT GTCGGTAACC TCTTCTCCGC GGATCTTTTC TACACGCCAG ACCCACAAAT GTTTGATGTG ATGGAAAAAT ACGGCATCTT GGGTGTAGAA ATGGAAGCCG CCGGTATCTA CGGCGTAGCG GCAGAGTTTG GTGCGAAGGC ACTGACTATC TGCACCGTTT CTGACCATAT CCGTACCGGC GAGCAGACTA CCGCGGCTGA ACGTCAGACC ACTTTTAATG ACATGATTGA GATCGCACTG GAATCTGTGT TACTGGGTGA TAACGCGTAA
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Protein sequence | MATPHINAEM GDFADVVLMP GDPLRAKFIA ETFLQDVREV NNVRGMLGFT GTYKGRKISV MGHGMGIPSC SIYAKELITD FGVKKIIRVG SCGAVRTDVK LRDVVIGMGA CTDSKVNRMR FKDHDYAAIA DFEMTRNAVD AAKAKGVNVR VGNLFSADLF YTPDPQMFDV MEKYGILGVE MEAAGIYGVA AEFGAKALTI CTVSDHIRTG EQTTAAERQT TFNDMIEIAL ESVLLGDNA
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