Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3621 |
Symbol | |
ID | 6089394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3995527 |
End bp | 3996909 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641598705 |
Product | DNA repair protein RadA |
Protein accession | YP_001722341 |
Protein GI | 170025836 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAG CACCCAAACG GGCGTTTGTC TGTAATGAAT GTGGCGCAGA TTATCCGCGT TGGCAGGGGC AATGCAGCGC CTGTAACGCC TGGAATACCA TTACCGAAGT CAGGCTGGCG GCGGTAGCGT CATCGTCTCG TAATGACCGT TTTGTTGGTT ATGCTGGCGA TGCCGGTGTT AGCCGGGTAC AGAAGCTGTC CGATATTAGT CTGGAGGAGC TGCCGCGCTT CTCAACTGGC TTCCTCGAGT TTGATCGGGT GCTGGGCGGC GGGGTGGTAC CGGGCAGTGC CATTCTGATT GGCGGTAACC CCGGTGCAGG CAAAAGTACT CTATTGCTGC AAACCCTCTG CAAACTGTCG GAAAACATGA AAACCCTGTA TGTCACTGGC GAAGAGTCGT TGCAGCAGGT CGCCATGCGT GCACACCGTC TGGGCCTGCC CACGGCGGGG CTGAATATGT TGTCGGAAAC CAGTATCGAG CAGATTTGCC TGATAGCAGA GCAAGAACAG CCACGGCTGA TGGTCATCGA CTCCATTCAA GTAATGCATA TGGCGGATAT CCAATCATCG CCGGGCAGTG TGGCGCAAGT GCGCGAAACC GCGGCTTATC TGACTCGTTT TGCTAAAACC CGGGGTGTCG CCATCGTGAT GGTGGGGCAT GTGACCAAAG ACGGTTCGCT GGCCGGGCCG AAGGTATTAG AACACTGTAT TGACTGCTCC GTGATGCTCG ATGGTGATGG CGACTCACGC TTTCGTACTC TGCGTAGCCA CAAGAACCGC TTTGGTGCTG TTAACGAACT GGGTGTGTTT GCCATGACCG AGCAAGGTCT ACGGGAAGTC AGTAATCCAT CGGCGATCTT TTTGAGCCGT GGCGATGAAG TGACCGCAGG CAGTTCAGTG ATGGTGGTGT GGGAAGGGAC TCGCCCATTG CTGGTGGAGA TCCAAGCGCT GGTAGATCAT TCGATGATGT CGAATCCACG CCGGGTCGCT GTCGGGCTGG AACAAAACCG TTTGGCCATC TTATTGGCTG TTTTACACCG CCACGGTGGT TTGCAGATGT CAGATCAAGA CGTGTTCGTT AACGTCGTTG GCGGGGTGAA AGTCACTGAA ACCAGCGCTG ATCTGGCATT GTTGATGTCG CTGGTCTCCA GTCTGCGTGA CCGCCCATTA CCGCAAGATT TAGTGGTGTT TGGCGAGGTG GGGCTGGCCG GTGAAATCCG CCCGGTACCA AGTGGTCAGG AGCGTATCTC CGAGGCGGCA AAGCACGGTT TTAAACGTGC CATCGTGCCT TATGCCAATA TGCCTAAAAA ACCGCTACCC AATATGCAGG TTTTCGGGGT AAAAAAACTG GCCGATGCGT TGGCTGTTTT AGAAGATTTA TAA
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Protein sequence | MAKAPKRAFV CNECGADYPR WQGQCSACNA WNTITEVRLA AVASSSRNDR FVGYAGDAGV SRVQKLSDIS LEELPRFSTG FLEFDRVLGG GVVPGSAILI GGNPGAGKST LLLQTLCKLS ENMKTLYVTG EESLQQVAMR AHRLGLPTAG LNMLSETSIE QICLIAEQEQ PRLMVIDSIQ VMHMADIQSS PGSVAQVRET AAYLTRFAKT RGVAIVMVGH VTKDGSLAGP KVLEHCIDCS VMLDGDGDSR FRTLRSHKNR FGAVNELGVF AMTEQGLREV SNPSAIFLSR GDEVTAGSSV MVVWEGTRPL LVEIQALVDH SMMSNPRRVA VGLEQNRLAI LLAVLHRHGG LQMSDQDVFV NVVGGVKVTE TSADLALLMS LVSSLRDRPL PQDLVVFGEV GLAGEIRPVP SGQERISEAA KHGFKRAIVP YANMPKKPLP NMQVFGVKKL ADALAVLEDL
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