Gene YPK_3612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3612 
Symbol 
ID6091081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3982153 
End bp3982545 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content50% 
IMG OID641598696 
ProductTrp operon repressor 
Protein accessionYP_001722332 
Protein GI170025827 
COG category[K] Transcription 
COG ID[COG2973] Trp operon repressor 
TIGRFAM ID[TIGR01321] trp operon repressor, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAC AATTTTTGAC TGACGAAAAA CAAGTGTCGG ATTCACTTAA TAGGCAGACG 
GCTGGGAACC CTTACTCTGC CGCTGATCCG GCATTGTCTG CCGAAGATAA TCAGCACTGG
TTGAGCTTTG TCGCGTTGTT GCAAAACGCG ATTACACAAG ATCTTCATCT GCCTTTACTG
CAACTGATGC TAACACCTGA TGAGCGAACC GCCTTGGGGA CGCGTGTGCG CATTATTGAA
GAGTTAATGC GCGGTGAGCT AAGCCAGCGT GAGCTGAAAA GTCAGTTAGG TGCAGGTATT
GCGACGATCA CCCGTGGCTC TAATAGCTTG AAAACGGCCC CACCACAGCT GAAAAGCTGG
CTCGAAGCCC AGTTGCTAGC CAACAAACGC TAA
 
Protein sequence
MTKQFLTDEK QVSDSLNRQT AGNPYSAADP ALSAEDNQHW LSFVALLQNA ITQDLHLPLL 
QLMLTPDERT ALGTRVRIIE ELMRGELSQR ELKSQLGAGI ATITRGSNSL KTAPPQLKSW
LEAQLLANKR