| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3603 |
|---|
| Symbol | |
|---|
| ID | 6089035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 3973917 |
|---|
| End bp | 3974846 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641598687 |
|---|
| Product | homoserine kinase |
|---|
| Protein accession | YP_001722323 |
|---|
| Protein GI | 170025818 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0083] Homoserine kinase |
|---|
| TIGRFAM ID | [TIGR00191] homoserine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.966452 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAAAA TCTATGCTCC GGCATCAATT GGCAATGTCA GCGTCGGCTT CGATGTATTA
GGTGCGGCGG TCTCGCCAAT AGATGGCACA TTGCTCGGTG ATTGTGTCAG CGTAACAGCC
GCAGAGCGTT TTAGCCTGCA TAATGAAGGC CGTTTTGTCA GCAAACTGCC TGATGATCCC
AAACAGAATA TCGTTTATCA GTGTTGGGAA CGCTTTTGCC AGGAAATGGG CAAAGAGATC
CCCGTCGCTA TGGTGCTGGA AAAGAATATG CCGATCGGTT CAGGGCTGGG TTCCAGCGCC
TGTTCAGTGG TTGCCGGCCT GATGGCGATG AATGAGTTCT GCGGCCAACC GTTGGATAAA
GTCACATTAC TCGGCATGAT GGGGGAACTG GAAGGGCGGG TCTCGGGCAG TATTCATTTC
GATAATGTCG CGCCTTGTTA TTTAGGGGGC ATGCAGCTGA TCCTTGAGCA GGAAGGTTAT
ATCAGTCAGG ATGTTCCTGG TTTTAGCGAT TGGTTATGGG TGATGGCCTA TCCGGGGATC
AAAGTGTCTA CCGCCGAAGC GCGGGCGATT TTACCGGCGC AGTATCGCCG TCAGGATTGC
ATCACTCATG GGCGTAATTT GGCGGGGTTC ATTCACGCTT GTCACACTCA GCAGCCAGAT
TTAGCCGCTA AAATGATGAA GGATGTTATC GCGGAACCTT ACCGCACTCA ATTGCTGCCA
GGCTTTGCTG CTGCACGACA AGCGGCACAG GATATCGGTG CGCTGGCCTG TGGTATTTCC
GGATCCGGCC CCACGTTGTT TGCCGTCTGT AACGACCAGG CAACCGCACA ACGCATGGCG
GGCTGGCTAC AAAATCATTA CCTGCAAAAC GACGAAGGTT TTGTTCATAT TTGCCGTCTG
GATACCGCAG GCGCACGACT ACTGGGATAA
|
|---|
| Protein sequence | MVKIYAPASI GNVSVGFDVL GAAVSPIDGT LLGDCVSVTA AERFSLHNEG RFVSKLPDDP
KQNIVYQCWE RFCQEMGKEI PVAMVLEKNM PIGSGLGSSA CSVVAGLMAM NEFCGQPLDK
VTLLGMMGEL EGRVSGSIHF DNVAPCYLGG MQLILEQEGY ISQDVPGFSD WLWVMAYPGI
KVSTAEARAI LPAQYRRQDC ITHGRNLAGF IHACHTQQPD LAAKMMKDVI AEPYRTQLLP
GFAAARQAAQ DIGALACGIS GSGPTLFAVC NDQATAQRMA GWLQNHYLQN DEGFVHICRL
DTAGARLLG
|
|---|
| |