| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3602 |
|---|
| Symbol | |
|---|
| ID | 6089130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 3972624 |
|---|
| End bp | 3973913 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641598686 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_001722322 |
|---|
| Protein GI | 170025817 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGT ATAACCTTAA AGATCATAAC GAGCAGGTCA GCTTCGCACA GGCGATCAAA
CAAGGCTTGG GCAAACAGCA GGGGCTATTT TTCCCGTTGG AGTTGCCCGA GTTCGAACTG
ACTGAGATCG ATAAACTGCT GGATCTGGAT TTTGTGACCC GTAGTAGCCG CATTCTGTCG
GCTTTTATTG GTAGTGAAAT TGCACCAGAT GTCTTAACCA AACGTGTGCA GGCAGCTTTT
GAATTCCCAG CCCCTGTTGC ACAAGTTGAA AATGATATCG CCGTTCTGGA GTTGTTCCAC
GGCCCGACCT TGGCGTTTAA AGACTTTGGC GCACGTTTTA TGGCACAGAT GCTGGCCGAA
GTTGCTGGCG ATCAACCCGT CACTATTTTA ACGGCAACAT CGGGTGATAC TGGTGCGGCG
GTGGCTCATG CATTCTACGG GCTGAAAAAT GTTCGAGTGG TTATCCTTTA TCCACGAGGC
AAGATTAGTC CGCTGCAAGA AAAGCTGTTT TGTACTCTGG GCGGTAATAT TCACACGGTG
GCGATTGATG GCGATTTTGA TGCTTGTCAG GCACTGGTTA AGCAAGCTTT TGATGATGAA
GAACTGAAAA CCGCGCTGAG TTTGAATTCC GCTAACTCAA TTAATATCAG CCGGTTACTG
GCACAAATTT GTTACTACTT TGAAGCTGTA GCCCAGTTAC CACAAGAGGC GCGCAACCAA
CTGGTTATCT CTGTACCAAG CGGTAACTTT GGTGATTTGA CTGCCGGTTT GTTGGCAAAA
TCTTTAGGGC TACCGGTGAA ACGCTTTATT GCTGCCACTA ATGCTAACGA CACCGTGCCA
CGCTTTTTGG TTAACGGCCA GTGGCAGCCA AAGCCAACTG TAGCCACGTT ATCGAATGCC
ATGGATGTCA GTCAGCCAAA TAATTGGCCA CGTGTGGAAG AGCTATATCG TCGCAAAATC
TGGCAGTTGA AGGATTTAGG GCATGGTGCG GTTAGCGATA AAACCACAAA AGATACGATG
CGTGAATTAG CTGGTTTGGG GTATATCTCT GAGCCTCACG CGGCGATTGC TTACCGTGTA
TTGCGTGATC AGTTGCAAGA TGGTGAATTT GGCTTGTTTA TCGGAACCGC ACATCCCGCG
AAATTCAAAG AGAGCGTAGA GGCAATTCTG GGTCAGGAAT TACCTTTACC AAAACCACTG
GCCGTGAGAG CGCAATTACC GTTGCTATCC CATGATTTGC CCGCAGACTT TGCACAAATG
CGGGCATTTT TGATGGCATT GCCGAAGTAA
|
|---|
| Protein sequence | MKLYNLKDHN EQVSFAQAIK QGLGKQQGLF FPLELPEFEL TEIDKLLDLD FVTRSSRILS
AFIGSEIAPD VLTKRVQAAF EFPAPVAQVE NDIAVLELFH GPTLAFKDFG ARFMAQMLAE
VAGDQPVTIL TATSGDTGAA VAHAFYGLKN VRVVILYPRG KISPLQEKLF CTLGGNIHTV
AIDGDFDACQ ALVKQAFDDE ELKTALSLNS ANSINISRLL AQICYYFEAV AQLPQEARNQ
LVISVPSGNF GDLTAGLLAK SLGLPVKRFI AATNANDTVP RFLVNGQWQP KPTVATLSNA
MDVSQPNNWP RVEELYRRKI WQLKDLGHGA VSDKTTKDTM RELAGLGYIS EPHAAIAYRV
LRDQLQDGEF GLFIGTAHPA KFKESVEAIL GQELPLPKPL AVRAQLPLLS HDLPADFAQM
RAFLMALPK
|
|---|
| |