Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3599 |
Symbol | |
ID | 6089593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3969546 |
End bp | 3970499 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641598683 |
Product | transaldolase B |
Protein accession | YP_001722319 |
Protein GI | 170025814 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.83514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGATA AACTTACTTC CCTACGTCAA ATCACCACTG TAGTCGCCGA TACTGGGGAT ATTGCGGCGA TGAAATTGTA TCAGCCGCAA GATGCAACGA CTAACCCATC GATTATTCTG AATGCTGCCC AAATCCCTGA ATACCGTAAA TTGATCGATG AAGCTATTAC CTGGGCGCGC GAACAAAGCA GCGATCATGC TCAGCAGATC GTTGATGCGA CGGATAAACT GGCAGTGAAT ATTGGTTTGG AAATTCTGAA ACTGATCCCT GGTCGTATTT CTACCGAAGT TGATGCTCGC TTGTCCTATG ATACCGTCGC CAGCGTGGCA AAAGCCAAAC GTCTGATCAA ACTGTATAAC GAAGCCGGTA TCAGCAATGA TCGTATTCTG ATCAAATTGG CCTCAACCTG GCAGGGCATC CGCGCTGCGG AGCAGTTGGA AAAAGAAGGT ATCAACTGTA ACCTGACACT GTTGTTCTCC TTCGCTCAGG CACGTGCTTG TGCTGAAGCG GGTGTGTTCC TTATTTCTCC TTTTGTTGGT CGTATTCTTG ATTGGTACAA AGCCAATGGC GATCAAAAAG AGTTCGCACC AAGCGAAGAT CCAGGTGTTG TTTCTGTCAC CGAGATTTAC CAGTACTACA AAAAACACGG TTATAAGACC GTGGTGATGG GTGCAAGCTT CCGTAATTTG GGTGAAATCA TTGAGTTAGC TGGTTGTGAC CGTTTGACTA TCGCCCCTTC ACTGCTGAAA GAGTTAGCAG AGAGCGAAGG CCCGGTAGAA CGTAAACTGG CTTACACCGG TGAAATTCAG GCGAAGCCTG CTCCATTGAC TGAAGCGGAA TTCTACTGGC AGCATAATCA GGATCCAATG GCGGTTGATA AACTGGCAGA CGGCATCCGC AAGTTTGCTA TCGACCAAGG CAAACTTGAG AAAATGATCT CCGACTTGTT GTAA
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Protein sequence | MTDKLTSLRQ ITTVVADTGD IAAMKLYQPQ DATTNPSIIL NAAQIPEYRK LIDEAITWAR EQSSDHAQQI VDATDKLAVN IGLEILKLIP GRISTEVDAR LSYDTVASVA KAKRLIKLYN EAGISNDRIL IKLASTWQGI RAAEQLEKEG INCNLTLLFS FAQARACAEA GVFLISPFVG RILDWYKANG DQKEFAPSED PGVVSVTEIY QYYKKHGYKT VVMGASFRNL GEIIELAGCD RLTIAPSLLK ELAESEGPVE RKLAYTGEIQ AKPAPLTEAE FYWQHNQDPM AVDKLADGIR KFAIDQGKLE KMISDLL
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