Gene YPK_3599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3599 
Symbol 
ID6089593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3969546 
End bp3970499 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content47% 
IMG OID641598683 
Producttransaldolase B 
Protein accessionYP_001722319 
Protein GI170025814 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.83514 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGATA AACTTACTTC CCTACGTCAA ATCACCACTG TAGTCGCCGA TACTGGGGAT 
ATTGCGGCGA TGAAATTGTA TCAGCCGCAA GATGCAACGA CTAACCCATC GATTATTCTG
AATGCTGCCC AAATCCCTGA ATACCGTAAA TTGATCGATG AAGCTATTAC CTGGGCGCGC
GAACAAAGCA GCGATCATGC TCAGCAGATC GTTGATGCGA CGGATAAACT GGCAGTGAAT
ATTGGTTTGG AAATTCTGAA ACTGATCCCT GGTCGTATTT CTACCGAAGT TGATGCTCGC
TTGTCCTATG ATACCGTCGC CAGCGTGGCA AAAGCCAAAC GTCTGATCAA ACTGTATAAC
GAAGCCGGTA TCAGCAATGA TCGTATTCTG ATCAAATTGG CCTCAACCTG GCAGGGCATC
CGCGCTGCGG AGCAGTTGGA AAAAGAAGGT ATCAACTGTA ACCTGACACT GTTGTTCTCC
TTCGCTCAGG CACGTGCTTG TGCTGAAGCG GGTGTGTTCC TTATTTCTCC TTTTGTTGGT
CGTATTCTTG ATTGGTACAA AGCCAATGGC GATCAAAAAG AGTTCGCACC AAGCGAAGAT
CCAGGTGTTG TTTCTGTCAC CGAGATTTAC CAGTACTACA AAAAACACGG TTATAAGACC
GTGGTGATGG GTGCAAGCTT CCGTAATTTG GGTGAAATCA TTGAGTTAGC TGGTTGTGAC
CGTTTGACTA TCGCCCCTTC ACTGCTGAAA GAGTTAGCAG AGAGCGAAGG CCCGGTAGAA
CGTAAACTGG CTTACACCGG TGAAATTCAG GCGAAGCCTG CTCCATTGAC TGAAGCGGAA
TTCTACTGGC AGCATAATCA GGATCCAATG GCGGTTGATA AACTGGCAGA CGGCATCCGC
AAGTTTGCTA TCGACCAAGG CAAACTTGAG AAAATGATCT CCGACTTGTT GTAA
 
Protein sequence
MTDKLTSLRQ ITTVVADTGD IAAMKLYQPQ DATTNPSIIL NAAQIPEYRK LIDEAITWAR 
EQSSDHAQQI VDATDKLAVN IGLEILKLIP GRISTEVDAR LSYDTVASVA KAKRLIKLYN
EAGISNDRIL IKLASTWQGI RAAEQLEKEG INCNLTLLFS FAQARACAEA GVFLISPFVG
RILDWYKANG DQKEFAPSED PGVVSVTEIY QYYKKHGYKT VVMGASFRNL GEIIELAGCD
RLTIAPSLLK ELAESEGPVE RKLAYTGEIQ AKPAPLTEAE FYWQHNQDPM AVDKLADGIR
KFAIDQGKLE KMISDLL